PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364418.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 511aa    MW: 58111.6 Da    PI: 6.742
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.44.5e-2963148187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+++e++aL+++r+em+ ++++++ k+plWe+vs+k++e g++rs+k+Ckek+en+ k+++++keg+ ++ ++ s+t+++f+qlea
  XP_027364418.1  63 RWPRDETMALLKIRSEMDVAFKDTSPKAPLWEQVSRKLAELGYHRSAKKCKEKFENIYKYHRRTKEGRCGK-PNGSKTYRFFEQLEA 148
                     8********************************************************************86.99999********85 PP
2trihelix97.41.2e-30346431187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k+ev aLi++r++++ +++ + +k+plWee+s +m+  g+ rs+k+Ckekwen+nk++k++ke +k++ + +s+tcpy+++lea
  XP_027364418.1 346 RWPKDEVEALIRLRTQLDVQSQGNGSKGPLWEEISLAMKNLGYDRSAKRCKEKWENINKYFKRMKEKNKRK-PSDSKTCPYYHHLEA 431
                     8********************************************************************96.99999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MLSLVLTLPM TIMPLEFLCC NSGKLMLEAV PPIENPEGGG VAVPDGLKAE HGEEGDRNSA  60
ANRWPRDETM ALLKIRSEMD VAFKDTSPKA PLWEQVSRKL AELGYHRSAK KCKEKFENIY  120
KYHRRTKEGR CGKPNGSKTY RFFEQLEALD GHHSLPPPPT TLPTSEEQLE VTAKSTTHVP  180
DNNVNVIEDA VPCSVRYPSA NAVEYYSSST TSSSGKGSKK KKLTQFFEGL MREVIEKQET  240
LQRKFMEVLE KCEQDRIARE EAWKNEELAR IKKEREVLAQ ERSIAAAKDE AVLAFLKKFT  300
ENTVQLPEKI QVQKEKDKDM VESGDRDKQE CGNVSVGNFI HMSSSRWPKD EVEALIRLRT  360
QLDVQSQGNG SKGPLWEEIS LAMKNLGYDR SAKRCKEKWE NINKYFKRMK EKNKRKPSDS  420
KTCPYYHHLE ALYSKKPKKV DESVGNSGNE LKPEELLMHI MESQEDRQQQ VESSSSEDGE  480
GENTDQNQRE NEDQGGYHMA IANSPSLAIM S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-68Trihelix family protein