PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364231.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 624aa    MW: 69098.8 Da    PI: 5.3399
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.46.1e-3156140187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+++e+laL+++r++m+ ++r+++ k+plWeevs+km+e+g++rs+k+Ckek+en+ k++k++keg+++++  + +t+++fdqlea
  XP_027364231.1  56 RWPREETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAEHGYHRSSKKCKEKFENVYKYHKRTKEGRSGKS--DGKTYRFFDQLEA 140
                     8********************************************************************964..5557*******85 PP
2trihelix103.71.3e-32439524187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k ev+aLi++r++++ +++++  k+plWee+s+ m++ g++r+pk+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  XP_027364231.1 439 RWPKVEVQALIKLRTSLDAKYQENGPKGPLWEEISNSMKKLGYNRNPKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFQQLDA 524
                     8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MLEDSAVLGG GGGGSEGGAS GDAVAATGGG GGVGSNSGDD EKGRIEEGER SFGGNRWPRE  60
ETLALLRIRS DMDVAFRDAS VKGPLWEEVS RKMAEHGYHR SSKKCKEKFE NVYKYHKRTK  120
EGRSGKSDGK TYRFFDQLEA LENHPPTSHS PNPSSKPQPL STRVVAATTT VSLPTTSTSP  180
PTTVPMLPVS NTTLTTSVPH VTVPSTTTLP IAMPQGIVTA PSINLTNPSY LPTNPTNFPP  240
PSTANPTTNA TPPSFPADTF SNSSSSSTSS DETLEGRRKR KRKWKDFFER LMKEVIEKQE  300
DLQKRFLEAI EKREHERMVR EESWRVQEMQ RINTEREILA QERSIAAAKD AAVMSFLQKI  360
AEQQNLGQAL SNINIVQAQA QAVSQPQSNA AAAPVQQQPP PVVAQPVVLP VVPQQQVTNM  420
EIVKADNNGE NFMPASSSRW PKVEVQALIK LRTSLDAKYQ ENGPKGPLWE EISNSMKKLG  480
YNRNPKRCKE KWENINKYFK KVKESNKKRP EDSKTCPYFQ QLDALYREKN KLENQQVPKP  540
PDSTVAPLMV RPEQQWPPQH DLMREREVTM QDVENEEDDE EEEREGEEEE DDEEDEEGGG  600
GGGGGNYEIV ANKNNASSVG ASAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277282RRKRKR
2277283RRKRKRK
3278283RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-97Trihelix family protein