PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364159.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 658aa MW: 73064.5 Da PI: 9.524

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.4e-05	74	95	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027364159.1 74 KCDKCSREFCSPINYRRHIRVH 95 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MPVAKLTASG SSDFTKTDDG NDSLDTIIRQ AIGKEPFLSF PRAGDSPVQW IQLLHALDQQ 60 GWPLLSPVKV QLQKCDKCSR EFCSPINYRR HIRVHHRLKK LDKDSKKNRD LLGAYWDKLS 120 VEEAKEVASF KNVMLEEVPG SSILKALTTI RKQGFSSFPQ YYLRSGSALL DIVQSRPSSF 180 PISSQELFSI LDDSSEKTFL CGSAVSMQRY VFDGEAGKIG LEPKNLVACT SFLLEQKLVK 240 EWLADKDAEA LRCQKLLVEE EEAAQKRQVE ILERKRQKKL RQKEHKARER LEDYSEIKAN 300 ISSTGDDESP AEVSFGTCDF EAHNPDIFAD HSPSSHVTPL CLDINEGIER DTLSGYDCDS 360 DQYIKRQISK THNRRRTVAA RRQGLPKSQW ARANGLHASQ NSQMSKLGVI KKHGINRDQR 420 AAPIVNSSKV WSRKPKPETN GVVLKAKLQK EPEKGKNHEV LIGSVSVSLG NCGQSEGNFV 480 ASQRDCLVEN LAKQNTTQEK PMKLDSSQGG NSRLTVKFWR PVSQHGTKDP LPLQSGGTEA 540 DVVNGKYDQN SSGSSNIRLC SLNGSGIDFG SSFPDTGANI DSGSLRLSSH AAKAFLAQRW 600 KEAISSNHVK LVVSPDFEPR GENRLPATSG VAEPTKPRTK PDKGIKIKYI PKQKTATE

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MPVAKLTASG SSDFTKTDDG NDSLDTIIRQ AIGKEPFLSF PRAGDSPVQW IQLLHALDQQ  60
GWPLLSPVKV QLQKCDKCSR EFCSPINYRR HIRVHHRLKK LDKDSKKNRD LLGAYWDKLS  120
VEEAKEVASF KNVMLEEVPG SSILKALTTI RKQGFSSFPQ YYLRSGSALL DIVQSRPSSF  180
PISSQELFSI LDDSSEKTFL CGSAVSMQRY VFDGEAGKIG LEPKNLVACT SFLLEQKLVK  240
EWLADKDAEA LRCQKLLVEE EEAAQKRQVE ILERKRQKKL RQKEHKARER LEDYSEIKAN  300
ISSTGDDESP AEVSFGTCDF EAHNPDIFAD HSPSSHVTPL CLDINEGIER DTLSGYDCDS  360
DQYIKRQISK THNRRRTVAA RRQGLPKSQW ARANGLHASQ NSQMSKLGVI KKHGINRDQR  420
AAPIVNSSKV WSRKPKPETN GVVLKAKLQK EPEKGKNHEV LIGSVSVSLG NCGQSEGNFV  480
ASQRDCLVEN LAKQNTTQEK PMKLDSSQGG NSRLTVKFWR PVSQHGTKDP LPLQSGGTEA  540
DVVNGKYDQN SSGSSNIRLC SLNGSGIDFG SSFPDTGANI DSGSLRLSSH AAKAFLAQRW  600
KEAISSNHVK LVVSPDFEPR GENRLPATSG VAEPTKPRTK PDKGIKIKYI PKQKTATE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	280	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-163	C2H2 family protein