PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364156.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 687aa MW: 76082.9 Da PI: 9.116

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.9e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027364156.1 77 KCDKCSREFCSPINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MPVAKLTASG SSDFTKTDDG NDSLDTIIRQ AIGKEPFLSF PRAGDSPVQW IQLLHALDQQ 60 ELPGWPLLSP VKVQLQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSKK NRDLLGAYWD 120 KLSVEEAKEV ASFKNVMLEE VPGSSILKAL TTIRKQGFSS FPQYYLRSGS ALLDIVQSRP 180 SSFPISSQEL FSILDDSSEK TFLCGSAVSM QRYVFDGEAG KIGLEPKNLV ACTSFLLEQK 240 LVKEWLADKD AEALRCQKLL VEEEEAAQKR QVEILERKRQ KKLRQKEHKA RERLEDYSEI 300 KANISSTGDD ESPAEVSFGT CDFEAHNPDI FADHSPSSHV TPLCLDINEG IERDTLSGYD 360 CDSDQYIKRQ ISKTHNRRRT VAARRQGLPK SQWARANGLH ASQNSQMSKL GVIKKHGINR 420 DQRAAPIVNS SKVWSRKPKP ETNGVVLKAK LQKEPEKGKN HEVLIGSVSV SLGNCGQSEG 480 NFVASQRDCL VENLAKQNTT QEKPMKLDSS QGGNSRLTVK FWRPVSQHGT KDPLPLQSGG 540 TEADVVNGKY DQNSSGSSNI RLCSLNGSGI DFGSSFPDTG ANIDSGSLRL SSHAAKAFLA 600 QRWKEAISSN HVKLVVSPDF EPRGGQLVKD CDQSACPSSN ADRCSILANT ENRLPATSGV 660 AEPTKPRTKP DKGIKIKYIP KQKTATE

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MPVAKLTASG SSDFTKTDDG NDSLDTIIRQ AIGKEPFLSF PRAGDSPVQW IQLLHALDQQ  60
ELPGWPLLSP VKVQLQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSKK NRDLLGAYWD  120
KLSVEEAKEV ASFKNVMLEE VPGSSILKAL TTIRKQGFSS FPQYYLRSGS ALLDIVQSRP  180
SSFPISSQEL FSILDDSSEK TFLCGSAVSM QRYVFDGEAG KIGLEPKNLV ACTSFLLEQK  240
LVKEWLADKD AEALRCQKLL VEEEEAAQKR QVEILERKRQ KKLRQKEHKA RERLEDYSEI  300
KANISSTGDD ESPAEVSFGT CDFEAHNPDI FADHSPSSHV TPLCLDINEG IERDTLSGYD  360
CDSDQYIKRQ ISKTHNRRRT VAARRQGLPK SQWARANGLH ASQNSQMSKL GVIKKHGINR  420
DQRAAPIVNS SKVWSRKPKP ETNGVVLKAK LQKEPEKGKN HEVLIGSVSV SLGNCGQSEG  480
NFVASQRDCL VENLAKQNTT QEKPMKLDSS QGGNSRLTVK FWRPVSQHGT KDPLPLQSGG  540
TEADVVNGKY DQNSSGSSNI RLCSLNGSGI DFGSSFPDTG ANIDSGSLRL SSHAAKAFLA  600
QRWKEAISSN HVKLVVSPDF EPRGGQLVKD CDQSACPSSN ADRCSILANT ENRLPATSGV  660
AEPTKPRTKP DKGIKIKYIP KQKTATE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	283	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-157	C2H2 family protein