PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027363911.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 354aa    MW: 37917.6 Da    PI: 6.3908
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027363911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17260293134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_027363911.1 260 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 293
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVGPNFMDEI DCGSFFDHID DLLDFPVEDV DGAAAATTLP SVAAAGNCNS LASIWPAESD  60
SFPGSDSVFS GNSASDLSAE LSVPYEDIVQ LEWLSNFVED SFCGGSLTMK KVEEPSSCTT  120
KEDSSSVHNQ FHTSSPVSVL ESSSSCSGGK TAPRSPEIYI PVPCGRARSK RPRPATFNPR  180
PAMQLISPAS SFVGENMQPN VISTKASSDS ENFAESQPVT KVAKQASGEP KKKKKVKLPL  240
PVGPADIINQ NANSQPVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP  300
AASPTFCASL HSNSHKKVLE MRCRGIDKSG FATHSAASPE LIPNTNSSLT LEYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170174KRPRP
2230236PKKKKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-41GATA family protein