PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363897.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 512aa MW: 56663.4 Da PI: 6.1271

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8.5e-16	302	348	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_027363897.1 302 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 348 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MNHCVPDFEI EMDDDEDYST PVSKKPSTQN NEIMELLWHN GQVVMQSQNQ RPFRKPPPPD 60 TKAGDGAIPA KEIRSSEAQN YSNQHLFMQE DEMASWLHYP INEDPSPFDH HDFCADILYP 120 PQNVAGSQNH NSAAIRTEEL RHPPPPVAPR PPILPARRPE QAANRIQNFA YFSKHSNARA 180 EPRPSSSSKA AAAQPKVVES SDTTVATAGH AETGCAAAGK AAAASSGGRE TGTCDLTLTS 240 SPGGSSGSAE PVQRETVVDR KRKGREQEES EFQSEDVDFE SPETKRQARG STSTKRSRAA 300 EVHNLSERRR RDRINEKMRA LQELIPRCNK SDKASMLDEA IEYLKSLQMQ VQMMSMGCGM 360 VPMMFPGIQQ YMPPMGMGIG MGMGMDMGMN RPVMPFPNML ASSTLPAATA ATHLGPRFPM 420 PPFHMPHVPI TSDPSRMQAA NQSENNNMQL NSLGTLDPDQ SRIPNFTDPY QQYLGLQQVQ 480 LQLMQAMNQP NVSKPSTSRG QENPEKHQSE ET

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MNHCVPDFEI EMDDDEDYST PVSKKPSTQN NEIMELLWHN GQVVMQSQNQ RPFRKPPPPD  60
TKAGDGAIPA KEIRSSEAQN YSNQHLFMQE DEMASWLHYP INEDPSPFDH HDFCADILYP  120
PQNVAGSQNH NSAAIRTEEL RHPPPPVAPR PPILPARRPE QAANRIQNFA YFSKHSNARA  180
EPRPSSSSKA AAAQPKVVES SDTTVATAGH AETGCAAAGK AAAASSGGRE TGTCDLTLTS  240
SPGGSSGSAE PVQRETVVDR KRKGREQEES EFQSEDVDFE SPETKRQARG STSTKRSRAA  300
EVHNLSERRR RDRINEKMRA LQELIPRCNK SDKASMLDEA IEYLKSLQMQ VQMMSMGCGM  360
VPMMFPGIQQ YMPPMGMGIG MGMGMDMGMN RPVMPFPNML ASSTLPAATA ATHLGPRFPM  420
PPFHMPHVPI TSDPSRMQAA NQSENNNMQL NSLGTLDPDQ SRIPNFTDPY QQYLGLQQVQ  480
LQLMQAMNQP NVSKPSTSRG QENPEKHQSE ET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	312	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	1e-35	bHLH family protein