PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363882.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1120aa MW: 126121 Da PI: 9.3265

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.7	3.6e-10	50	85	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_027363882.1 50 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSTEMV 85 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1120 aa Download sequence
MAPTRKSRSV NKRISSSNDI SPEKDGVNSG VNSSKSKQRK KKLTDKLGSQ WSKEELERFY 60 EAYRKYGKDW KKVAAVVRNR STEMVEALYS MNRAYLSLPE GTASVVGLIA MMTDHYNVLE 120 GTDSERESND ASGSRKPVKR KREKVRFCVS KDPVQSQSIP SSDGCLSLLK RRRVDGIQPR 180 VVGKRTPRVP VCYSYKRDDT ENYASPNKKI LKSAVDANDD EVAHVVALAL TEAAQRGGSP 240 QVSQTPYRRI EQKSSSPIRS WERKHQMSKT ARVKVRDVSA DEEFLEGSIE SQGAENGEYA 300 RDNSSLLDME GIGTVKVLQK GGKFYRKKER VENVGNHQLD DGGEACSGTE EGFSFSSLKE 360 KDYIEVTNEK LEKFSKRNQR NRNKKLFFGD ETLALNALQT LADLSLMMPT STIESESSIQ 420 LKRERMTTDK DDKFALPEAT STSHKRHKLK HTVVPEIELS TFKKSKLGKE LAKDTNALSE 480 SKEQLPFADA TWKRKRKSMV SKVANAKLNS YPSGPLKNEA VDDENKPIIK GKHIDQVFTL 540 PKQLKIVRSS ESSLCSDQQN LTVSTAEVPL ISGVSLPTKR SRRKMILQRA FMPKETSSDN 600 ILKSQPDKYS TLKEKLSSCL SSCMVGRWFI FEWFYSAIDY PWFAKREFME YLNHVGLGNI 660 PRLTRVEWSV IKSSLGKPRR FSEHFLREER LKLEQYRESV RKHYTELQTG IRDGLPTDLA 720 RPLYVGQRVI ALHPKTREIH DGSVLTVDYD KCRIQFDCPE LGVEFVMDID CMPLNPLDNM 780 PEALRRQIGA RKASLLTKEP QINGKSCFGG CETCTSPVKA KVAAIDNLCA QAGYTQLCKV 840 THHQAKEADI HALSELKRAL DKKDTLLMEL QKAHSDILEN QNGIQCFKDS ESFKKYYATV 900 SDTMLQLRQR NTCTGNSLPP WMNPQASFNV HGDLSSMLDS SVMLESGSTV VEIIKGSRLR 960 ANAMVDAAFQ ALSLTKEDED AFMKIGQALD SMNHQQLASK SQLPMIRSQE QVNGGFYHHN 1020 HSTSCITEHL LNDVCGPKLQ NASDKVDAEI PSELITSCVA TLIMIQTCTE RQYPPADVAQ 1080 ILDSAVTSLQ PCCPRNLRIY REIQMCMGRI KTQILALIPA

Sequence ? help Back to Top

Protein Sequence Length: 1120 aa Download sequence

MAPTRKSRSV NKRISSSNDI SPEKDGVNSG VNSSKSKQRK KKLTDKLGSQ WSKEELERFY  60
EAYRKYGKDW KKVAAVVRNR STEMVEALYS MNRAYLSLPE GTASVVGLIA MMTDHYNVLE  120
GTDSERESND ASGSRKPVKR KREKVRFCVS KDPVQSQSIP SSDGCLSLLK RRRVDGIQPR  180
VVGKRTPRVP VCYSYKRDDT ENYASPNKKI LKSAVDANDD EVAHVVALAL TEAAQRGGSP  240
QVSQTPYRRI EQKSSSPIRS WERKHQMSKT ARVKVRDVSA DEEFLEGSIE SQGAENGEYA  300
RDNSSLLDME GIGTVKVLQK GGKFYRKKER VENVGNHQLD DGGEACSGTE EGFSFSSLKE  360
KDYIEVTNEK LEKFSKRNQR NRNKKLFFGD ETLALNALQT LADLSLMMPT STIESESSIQ  420
LKRERMTTDK DDKFALPEAT STSHKRHKLK HTVVPEIELS TFKKSKLGKE LAKDTNALSE  480
SKEQLPFADA TWKRKRKSMV SKVANAKLNS YPSGPLKNEA VDDENKPIIK GKHIDQVFTL  540
PKQLKIVRSS ESSLCSDQQN LTVSTAEVPL ISGVSLPTKR SRRKMILQRA FMPKETSSDN  600
ILKSQPDKYS TLKEKLSSCL SSCMVGRWFI FEWFYSAIDY PWFAKREFME YLNHVGLGNI  660
PRLTRVEWSV IKSSLGKPRR FSEHFLREER LKLEQYRESV RKHYTELQTG IRDGLPTDLA  720
RPLYVGQRVI ALHPKTREIH DGSVLTVDYD KCRIQFDCPE LGVEFVMDID CMPLNPLDNM  780
PEALRRQIGA RKASLLTKEP QINGKSCFGG CETCTSPVKA KVAAIDNLCA QAGYTQLCKV  840
THHQAKEADI HALSELKRAL DKKDTLLMEL QKAHSDILEN QNGIQCFKDS ESFKKYYATV  900
SDTMLQLRQR NTCTGNSLPP WMNPQASFNV HGDLSSMLDS SVMLESGSTV VEIIKGSRLR  960
ANAMVDAAFQ ALSLTKEDED AFMKIGQALD SMNHQQLASK SQLPMIRSQE QVNGGFYHHN  1020
HSTSCITEHL LNDVCGPKLQ NASDKVDAEI PSELITSCVA TLIMIQTCTE RQYPPADVAQ  1080
ILDSAVTSLQ PCCPRNLRIY REIQMCMGRI KTQILALIPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	174	KRRRV
2	170	212	KRRRVDGIQPRVVGKRTPRVPVCYSYKRDDTENYASPNKKILK
3	578	585	TKRSRRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein