PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363799.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 465aa MW: 52466.8 Da PI: 7.8194

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.4e-08	338	385	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lv++v ++G g+W+ I r + Rt+ +++++w+++l XP_027363799.1 338 WTLSEVMKLVEGVSEYGVGRWTDIKRFLFsssSYRTPIDLRDKWRNLL 385 **************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MDREEYLRKC SNMKCQRVQM DESSVPSLQD EVMEVERLLA EPRNDHVSVD SSLDSHTTLN 60 SKDDLELEVL DGLLDDVEID DLEGTDGFSG ACEEYFLDFD FANKAEVLGS GPSEVSLLQN 120 SSSESHSSGL SGSSIIGGVL QSTKVPNAQS ECKIDSLDEA ATNESHGAFR NNLSQPSNVN 180 CMYNISLDLQ HLHELDNNHH FVGGILSCEK EKGPVVKSQP AAHREKRSRK PTQRYIEEFS 240 NLRSKEKGPA TGTKTKHLSD PSCNELRIRI KALKKIPGEK SSNENNDVMF PELQVRKGRP 300 KIEKLEYDDE PSPSESEDGS LTSKKARRKD RRKHQRMWTL SEVMKLVEGV SEYGVGRWTD 360 IKRFLFSSSS YRTPIDLRDK WRNLLRASTV QKFNKKEAEQ NDEHALRPLP FIVVRRVREL 420 AKIHPYPRQR GSKKSRVSPI GSSAIAKDSP PVSLSKRNVS RKKCT

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MDREEYLRKC SNMKCQRVQM DESSVPSLQD EVMEVERLLA EPRNDHVSVD SSLDSHTTLN  60
SKDDLELEVL DGLLDDVEID DLEGTDGFSG ACEEYFLDFD FANKAEVLGS GPSEVSLLQN  120
SSSESHSSGL SGSSIIGGVL QSTKVPNAQS ECKIDSLDEA ATNESHGAFR NNLSQPSNVN  180
CMYNISLDLQ HLHELDNNHH FVGGILSCEK EKGPVVKSQP AAHREKRSRK PTQRYIEEFS  240
NLRSKEKGPA TGTKTKHLSD PSCNELRIRI KALKKIPGEK SSNENNDVMF PELQVRKGRP  300
KIEKLEYDDE PSPSESEDGS LTSKKARRKD RRKHQRMWTL SEVMKLVEGV SEYGVGRWTD  360
IKRFLFSSSS YRTPIDLRDK WRNLLRASTV QKFNKKEAEQ NDEHALRPLP FIVVRRVREL  420
AKIHPYPRQR GSKKSRVSPI GSSAIAKDSP PVSLSKRNVS RKKCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	332	KKARRKDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	6e-26	MYB_related family protein