PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363219.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 744aa MW: 85524.7 Da PI: 6.8679

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.8	1.7e-29	283	368	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r+ + +++++f+qlea XP_027363219.1 283 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMfEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRH--DGKHYRFFRQLEA 368 8***********************************99**************************985..5557*****85 PP
2	trihelix	53.8	5.1e-17	583	666	2	84
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 W+++e+ L ++r eme+r+ + +++++ Weev+ km+ g++rs+ +C+ekwe+++++ + + +k++ e+s++c yf++ XP_027363219.1 583 WPESEITRLQQLRAEMETRFPQsECSEEVTWEEVATKMACFGYQRSALMCREKWESISNYPRDDGKEGNKKRRENSRSCFYFKN 666 ******************97368*******************************99875555555688999***85 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MYVCDLSEIL WEFREAIYGG LNLRAKLEAA EGVLESKCKP VVAELRRVEG RGFWCKPAWR 60 WDGYQTGLEG VFYIVGEQAR LVLVIGHLSI FAFRGTVKIN DNQDPTLPLL PLLLLLHTLS 120 LSLPTSYFFI TSPSLYLNSQ LMETEDHHHH HHHHHHHHQQ QQHQYAMNMN DLRQVVNGPR 180 PVHNFPSMPS HPTAELFPGH RNLTTFQPPT SQHHQQHYEV MMFGRDIMPR GLHDFASATD 240 SAAASITIPT PVTAAAATAS TPPLSGFEVE GAGCIGGDAS TGRWPRQETL TLLEIRSRLD 300 PKFKEANQKG PLWDEVSRIM FEEHGYQRSG KKCREKFENL YKYYKKTKEG KAGRHDGKHY 360 RFFRQLEALY GENSNTVSVP ETNVVSSIHF QTSGHAPAPT NQEMFQSHNK HCDSLSLTNS 420 TDFDTSSSDN DGNNHTMENE SMEKRRKRKS GRSWKVKIKN FIDSQMRKLV EKQKEWLDKL 480 VKTLEEKERE RVLREEEWRK QEASRLEREQ KFWAKERAWI EARDAALMEA LQKLTAREIM 540 KIEPHEGVNV IATGVQNHSE NQNNEDGSEI LNCGTVIRGA DSWPESEITR LQQLRAEMET 600 RFPQSECSEE VTWEEVATKM ACFGYQRSAL MCREKWESIS NYPRDDGKEG NKKRRENSRS 660 CFYFKNNDDH QPSLYNQGST YCDDINDQRQ EIERLQTNDG CSPSNSNVGN VAPADSCFPF 720 LMSTEGGNLW ENYGLKLNKA NQNH

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MYVCDLSEIL WEFREAIYGG LNLRAKLEAA EGVLESKCKP VVAELRRVEG RGFWCKPAWR  60
WDGYQTGLEG VFYIVGEQAR LVLVIGHLSI FAFRGTVKIN DNQDPTLPLL PLLLLLHTLS  120
LSLPTSYFFI TSPSLYLNSQ LMETEDHHHH HHHHHHHHQQ QQHQYAMNMN DLRQVVNGPR  180
PVHNFPSMPS HPTAELFPGH RNLTTFQPPT SQHHQQHYEV MMFGRDIMPR GLHDFASATD  240
SAAASITIPT PVTAAAATAS TPPLSGFEVE GAGCIGGDAS TGRWPRQETL TLLEIRSRLD  300
PKFKEANQKG PLWDEVSRIM FEEHGYQRSG KKCREKFENL YKYYKKTKEG KAGRHDGKHY  360
RFFRQLEALY GENSNTVSVP ETNVVSSIHF QTSGHAPAPT NQEMFQSHNK HCDSLSLTNS  420
TDFDTSSSDN DGNNHTMENE SMEKRRKRKS GRSWKVKIKN FIDSQMRKLV EKQKEWLDKL  480
VKTLEEKERE RVLREEEWRK QEASRLEREQ KFWAKERAWI EARDAALMEA LQKLTAREIM  540
KIEPHEGVNV IATGVQNHSE NQNNEDGSEI LNCGTVIRGA DSWPESEITR LQQLRAEMET  600
RFPQSECSEE VTWEEVATKM ACFGYQRSAL MCREKWESIS NYPRDDGKEG NKKRRENSRS  660
CFYFKNNDDH QPSLYNQGST YCDDINDQRQ EIERLQTNDG CSPSNSNVGN VAPADSCFPF  720
LMSTEGGNLW ENYGLKLNKA NQNH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	444	472	KRRKRKSGRSWKVKIKNFIDSQMRKLVEK
2	444	474	KRRKRKSGRSWKVKIKNFIDSQMRKLVEKQK
3	445	475	KRRKRKSGRSWKVKIKNFIDSQMRKLVEKQK
4	446	476	KRRKRKSGRSWKVKIKNFIDSQMRKLVEKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-117	Trihelix family protein