PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027362838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 24342.5 Da PI: 11.029 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.7e-10 | 54 | 100 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR riN +e+Lr +lP++ K +Ka++L ++++ +k+L XP_027362838.1 54 KKHSEAEKRRRMRINGQYETLRNVLPNL-----IKKDKATVLAETIKQVKEL 100 68*************************9.....5899999999999988877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVLLRQGIQH VRNYYNSEAQ MIRSSFSRPF ISQTYKQGFS KPRSKAEVKL LAAKKHSEAE 60 KRRRMRINGQ YETLRNVLPN LIKKDKATVL AETIKQVKEL KKKVSKLEED SHGNPKEVKF 120 PSGADRLNLE KCYDSQGLVK ATLSCEDRPG LMSAITRALG SVKAKVVKVE MVTVGGRTRS 180 VLWVQGHGNE GLGMLKSTLK VAMHKPAFKM RRFTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 5e-42 | bHLH family protein |