PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362777.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 474aa MW: 52609.7 Da PI: 9.1805

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00034	419	441	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C+k F++ L H r+H XP_027362777.1 419 HECPICNKIFRSGQALGGHKRSH 441 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MEERKFVCKY CSKRFPCGKS LGGHIRTHMS EHSTQGNDNG NAANATAKFD PGRKRKRDLE 60 SEVVDGGNII YGLRENPKKT TRFVHSNATL QLDKFCKECG KGFPSLKALC GHMACHSEKD 120 KGTNNNNNHR FENNSEKHKL VLDSQSDTET SAPTRRSKRM RFKTLSNQPP SSSVSEVEQE 180 QEEVARCLML LSKDSTHKGR FALVTESSDN NSVVLEAKSP SLDTKVTVNN GKNFVPSAYE 240 LVDKKKLLQH KDMKLKLKLK SAEIGYDSDN SDSGYFRYGP KKVDSDGSNE GVFRNEVKSS 300 KVGYFSGFED YDVESRKLLS RGGSGSNEFK KFVLEDSSRK VANGFTNDGI IEHGGKGWKY 360 ECLTSERDND FDDLAYESDE NSTDTDSYPA PKTHTSRNPS GKKCSKGKKK LKSKKSKAHE 420 CPICNKIFRS GQALGGHKRS HFVGGSDENT LVIRPGAASV PCLIDLNLPA PVDE

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MEERKFVCKY CSKRFPCGKS LGGHIRTHMS EHSTQGNDNG NAANATAKFD PGRKRKRDLE  60
SEVVDGGNII YGLRENPKKT TRFVHSNATL QLDKFCKECG KGFPSLKALC GHMACHSEKD  120
KGTNNNNNHR FENNSEKHKL VLDSQSDTET SAPTRRSKRM RFKTLSNQPP SSSVSEVEQE  180
QEEVARCLML LSKDSTHKGR FALVTESSDN NSVVLEAKSP SLDTKVTVNN GKNFVPSAYE  240
LVDKKKLLQH KDMKLKLKLK SAEIGYDSDN SDSGYFRYGP KKVDSDGSNE GVFRNEVKSS  300
KVGYFSGFED YDVESRKLLS RGGSGSNEFK KFVLEDSSRK VANGFTNDGI IEHGGKGWKY  360
ECLTSERDND FDDLAYESDE NSTDTDSYPA PKTHTSRNPS GKKCSKGKKK LKSKKSKAHE  420
CPICNKIFRS GQALGGHKRS HFVGGSDENT LVIRPGAASV PCLIDLNLPA PVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	1e-88	C2H2 family protein