PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362750.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 370aa MW: 41815.6 Da PI: 7.362

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.7e-05	129	148	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_027362750.1 129 FSCTVCNKMFNRFNNMQMHM 148 89*****************9 PP
2	zf-C2H2	13.5	0.00021	214	236	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ XP_027362750.1 214 FGCRKCGKPFAVRGDWRTHEKNC 236 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MQTHPFSYIP SCPRSAFLEP DHDHEAVVDE ASISLSLGPP GQQHNPKVSS SFSNHPSTLH 60 HHHQQNPTSE DQSGVTVALH IGLPNPTTSP NSTNHPTTKP HDLHLASTPI QGQYWIPSPA 120 QILIGPTQFS CTVCNKMFNR FNNMQMHMWG HGSQYRKGPE SLRGAKPASS MLRLPCYCCA 180 EGCKNNIDHP RSRPLKDFRT LQTHYKRKHG AKPFGCRKCG KPFAVRGDWR THEKNCGKLW 240 FCICGSDFKH KRSLKDHVRA FGDGHAPHTV ESCDQMGEDE LLGDEDDEDL ELDEEDEDDS 300 NNNSEREKGC EKMETNSEMK AKVLAFNARS GKRERGSQEY SVTADERQTC RQGQSQILLF 360 KTLHLHCHRY

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MQTHPFSYIP SCPRSAFLEP DHDHEAVVDE ASISLSLGPP GQQHNPKVSS SFSNHPSTLH  60
HHHQQNPTSE DQSGVTVALH IGLPNPTTSP NSTNHPTTKP HDLHLASTPI QGQYWIPSPA  120
QILIGPTQFS CTVCNKMFNR FNNMQMHMWG HGSQYRKGPE SLRGAKPASS MLRLPCYCCA  180
EGCKNNIDHP RSRPLKDFRT LQTHYKRKHG AKPFGCRKCG KPFAVRGDWR THEKNCGKLW  240
FCICGSDFKH KRSLKDHVRA FGDGHAPHTV ESCDQMGEDE LLGDEDDEDL ELDEEDEDDS  300
NNNSEREKGC EKMETNSEMK AKVLAFNARS GKRERGSQEY SVTADERQTC RQGQSQILLF  360
KTLHLHCHRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-119	C2H2 family protein