PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362548.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 266aa MW: 30188.3 Da PI: 8.8873

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.7	7.1e-41	77	213	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssa.sec..eaesssssasnsssgkaa 91 +kkd hskihT++g+RdRRvRls+e+a++fFdLqd+L +dk+s+t+ WL+ + + aikel+g+ +s +a +c ++ + ++ ++ns+ +k XP_027362548.1 77 TKKDGHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEHDKPSNTLKWLFAKCENAIKELAGSkhrCSGPAmCFCfsSEIQGQQGVHNSHDNKML 171 79***********************************************************66633333344464455555555555555555 PP TCP 92 ksaakskksqksaasalnlakesrakarararertrekmrikn 134 + +k+kk +k+ + +ke r +arararert+ km ++ XP_027362548.1 172 MEGTKEKKLKKERV-CFQAKKECRVRARARARERTSTKMLRTS 213 55555555555555.788999****************7665 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MFSSNYPTNP FPSLPSSPSY YPPLPFLTES ENAFEINTLL YDAHPLAVPI SDLTVADYAI 60 TLQKQTINND NGRIMSTKKD GHSKIHTSQG LRDRRVRLSS EIARKFFDLQ DMLEHDKPSN 120 TLKWLFAKCE NAIKELAGSK HRCSGPAMCF CFSSEIQGQQ GVHNSHDNKM LMEGTKEKKL 180 KKERVCFQAK KECRVRARAR ARERTSTKML RTSNPQIQQQ LVPPIQPQTC ASARWPNGSE 240 AYTDCFDVIE ESVSMNLSTG TYYLNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	194	204	RVRARARARER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-21	TCP family protein