PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027362336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20223.4 Da PI: 4.9097 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 16 | 65 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +++kGVr++k +g+Wv+eIr+p g + r +lg++ t+e Aa a++ a l+ XP_027362336.1 16 KKFKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYATPEAAAVAHDVAVYFLR 65 59*****998.**********8...3.35********************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MSWSSALHGT SPNGDKKFKG VRRRKWGKWV SEIRVPGTQE RLWLGTYATP EAAAVAHDVA 60 VYFLRRPSKL DKLNFPETLS SYCVQHRDMS PRSVQKVASD AGMDVDARNI VAGETSTVAE 120 TYENEKRIGG DDDHVHNSSV DDLLWWDIDG LGDDDFVTCN ASCEGEALSV SIEDYGALWK 180 SL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 5e-39 | ERF family protein |