PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362205.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 217aa MW: 25283.5 Da PI: 8.4234

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	54	108	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+++++ eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_027362205.1 54 KKRKLSLEQVNLLELNFGNEHKLESERKDRLAMELGLDPRQVAVWFQNRRARWKN 108 5668999**********************************************95 PP
2	HD-ZIP_I/II	115.2	3.9e-37	53	145	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kkr+ls eqv+lLE +F +e+kLe+erK +la eLgl+prqvavWFqnrRAR+k+k+lE++y+ Lk+++++ e++rLe+ev +L+++l+e XP_027362205.1 53 NKKRKLSLEQVNLLELNFGNEHKLESERKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKNHETTLLEKCRLESEVLKLKDQLSE 145 59****************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MNHRPIQDHM MLISQLYPAG AYTQIITQQG EKKPRRRRNK KSKGGENGAS EANKKRKLSL 60 EQVNLLELNF GNEHKLESER KDRLAMELGL DPRQVAVWFQ NRRARWKNKK LEEEYSNLKK 120 NHETTLLEKC RLESEVLKLK DQLSEAEKEI QRLLERADRV PSNSSSTSSQ SQSQSQSMEA 180 VDPPFLGEFG VDGYDDDVFY VPETHYINGM EWINVFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	57	RRRRNKKSKGGENGASEANKKRK
2	36	58	RRRRNKKSKGGENGASEANKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	2e-59	HD-ZIP family protein