PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362074.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 243aa    MW: 27553.2 Da    PI: 7.7793
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002679101123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C k F ++  L  H++ H
  XP_027362074.1  79 FECQYCFKEFANSQALGGHQNAH 101
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MERDVCDLSS TWDGDNGNSV EKRLRLFGFE LNPSKNTEGC VKESGEGDES VNSSNSVSSG  60
GEKTVQEKSS AKDSDERKFE CQYCFKEFAN SQALGGHQNA HKKERMKKKR LQLQARKASI  120
NYYLQPFQTN HGFAYHGSDT PWFYDPSSYN SEFTLCEEPQ ISFNSNVLDT NFSYDHKSSR  180
YSLPSRPPSQ QDTCMFTFSN TNNSPFIIKP CHFPPSNQSR SKALDLQLGL NLQSNTRSSL  240
RRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.12e-16C2H2 family protein