PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027362054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | SBP | ||||||||
Protein Properties | Length: 127aa MW: 14345.1 Da PI: 10.0219 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 126 | 1.5e-39 | 43 | 119 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C+ ++C +dls ak+y+rrhkvCe h+kapvvlvs ++qrfCqqCs+fhel efD++krsCr rLa+hnerrrk+q+ XP_027362054.1 43 CRSDECGVDLSMAKNYNRRHKVCERHAKAPVVLVSSIRQRFCQQCSKFHELAEFDNKKRSCRARLAGHNERRRKTQT 119 99************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MNNEDGEVVE AVNGDKKVPN ITIKVVREKG STKSSSSSSF SFCRSDECGV DLSMAKNYNR 60 RHKVCERHAK APVVLVSSIR QRFCQQCSKF HELAEFDNKK RSCRARLAGH NERRRKTQTD 120 QSSGGDH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 116 | KKRSCRARLAGHNERRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 1e-34 | SBP family protein |