PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362021.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 1016aa MW: 112798 Da PI: 7.5383

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.2	7.5e-41	146	223	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_027362021.1 146 VCQVEDCRADLSNAKDYHRRHKVCDMHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 223 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1016 aa Download sequence
MEAQFEGKNQ YLYGLVVPEM KGVGKRSLEW DLNDWKWDGD LFTARQLNSV PSDCRSRQLF 60 PTDPEILSNV DTSNNLSSGY DDINHGEGKR ELEKRRRGVV DEGVEMNDEA GSLNLNLGGQ 120 VYPIMEGEEK SGKKTKITGT TSSRAVCQVE DCRADLSNAK DYHRRHKVCD MHSKATKALV 180 GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK THPDSTVVSG GSQNEEKGSS 240 YLLMSLLRIL SNMHCEFVNQ DVLSHLLRNL ASLAGTTNGR NIASLLEGSQ DLVKAGTSGA 300 AQDVPNTNSN GAEPSRPCGS SIKINDGLIR QDPPESRLQC ETIPANDMAQ KCIASGSGGV 360 GRLKSPPGPQ SSNLLLSRDS LPPHSVAAET TVGRIGLSNI DLNNVYDDVQ DYAEYPMNSR 420 PPVPLGIESL DNPLQVQCDS LKSSPPQTSR NSDSTSTQSP SSSSGEAQSR TDRIVFKLFG 480 KAPNDFPLAL RSQVLNWLSH SPTEIESYIR PGCIILTIYL RLENSAWEEL CCNLGSSLRK 540 LASSNDSFWR TGWVYTRVRH SVAFLYNGQV VLDVPLRLKS PQSSKILCIK PLAVSQTASV 600 QFIVKGFNLF QSNTRLLCSL EGKYLVQDSC YNLIDGTNTA IEHHELQRLS FSCHIPNVTG 660 RGFIEVEDNG LSGCSFPFIV AEQEICSEIC KLESVIEAAE TADDIQIKTK LMEEKTRALY 720 FIQEMGWLLH RSRVKVRLGP MAPGQECFHF NRFTWLVGFS MDHDWCAVMK KLLDIIFEGA 780 VDTGEHTSAE LALLDMGLLH RAVKRNCRPM VELLLKFVPK QVNKSPDRFL FRPDIVGPAG 840 LTPLHIAASM HGSENVLEAL TDDPGMVGTE AWKSARDTTG LTPNDYASLR GYYSYIQLVQ 900 RKTSKKCESE HVLDIPGTLV DSNIKQKQLD GHRSSKVSSL QTEKIEITSM PHQCGLCQRK 960 LAYGGTRRAL VYRPAMLSMV AIAAVCVCVA LLFKSSPKVY YVFQPFSWES LEYGSI

Sequence ? help Back to Top

Protein Sequence Length: 1016 aa Download sequence

MEAQFEGKNQ YLYGLVVPEM KGVGKRSLEW DLNDWKWDGD LFTARQLNSV PSDCRSRQLF  60
PTDPEILSNV DTSNNLSSGY DDINHGEGKR ELEKRRRGVV DEGVEMNDEA GSLNLNLGGQ  120
VYPIMEGEEK SGKKTKITGT TSSRAVCQVE DCRADLSNAK DYHRRHKVCD MHSKATKALV  180
GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK THPDSTVVSG GSQNEEKGSS  240
YLLMSLLRIL SNMHCEFVNQ DVLSHLLRNL ASLAGTTNGR NIASLLEGSQ DLVKAGTSGA  300
AQDVPNTNSN GAEPSRPCGS SIKINDGLIR QDPPESRLQC ETIPANDMAQ KCIASGSGGV  360
GRLKSPPGPQ SSNLLLSRDS LPPHSVAAET TVGRIGLSNI DLNNVYDDVQ DYAEYPMNSR  420
PPVPLGIESL DNPLQVQCDS LKSSPPQTSR NSDSTSTQSP SSSSGEAQSR TDRIVFKLFG  480
KAPNDFPLAL RSQVLNWLSH SPTEIESYIR PGCIILTIYL RLENSAWEEL CCNLGSSLRK  540
LASSNDSFWR TGWVYTRVRH SVAFLYNGQV VLDVPLRLKS PQSSKILCIK PLAVSQTASV  600
QFIVKGFNLF QSNTRLLCSL EGKYLVQDSC YNLIDGTNTA IEHHELQRLS FSCHIPNVTG  660
RGFIEVEDNG LSGCSFPFIV AEQEICSEIC KLESVIEAAE TADDIQIKTK LMEEKTRALY  720
FIQEMGWLLH RSRVKVRLGP MAPGQECFHF NRFTWLVGFS MDHDWCAVMK KLLDIIFEGA  780
VDTGEHTSAE LALLDMGLLH RAVKRNCRPM VELLLKFVPK QVNKSPDRFL FRPDIVGPAG  840
LTPLHIAASM HGSENVLEAL TDDPGMVGTE AWKSARDTTG LTPNDYASLR GYYSYIQLVQ  900
RKTSKKCESE HVLDIPGTLV DSNIKQKQLD GHRSSKVSSL QTEKIEITSM PHQCGLCQRK  960
LAYGGTRRAL VYRPAMLSMV AIAAVCVCVA LLFKSSPKVY YVFQPFSWES LEYGSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	222	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein