PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361848.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 299aa MW: 33490.6 Da PI: 8.0313

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++F++ L H++ H XP_027361848.1 4 HKCKLCSRTFPNGRALGGHMKAH 26 79******************998 PP
2	zf-C2H2	13.9	0.00016	198	220	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k+F ++ L +H + + XP_027361848.1 198 FQCDNCDKTFQSPRALGSHKSIC 220 89*****************9885 PP
3	zf-C2H2	11.7	0.00079	237	259	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+F + L H r+H XP_027361848.1 237 FECPFCSKVFGSGQALGGHKRSH 259 89**************9999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MERHKCKLCS RTFPNGRALG GHMKAHLATL PLPPKPQPLS FSSSEDEHHA PAHRESDDKA 60 LIYGLRENPK KSLRLADPGF SFPVDTGSVV QDRESETESK NPTRRRSKRT RKPVQAQNLE 120 EPKRPKLSFM ESPTEPEPLS SVSDTSPEED VAMCLMMLSR DRWRRNKVVA VKEEEKSVEN 180 SKGLLEEEIK FRRVRGKFQC DNCDKTFQSP RALGSHKSIC VHDEAGNINN NDNERIFECP 240 FCSKVFGSGQ ALGGHKRSHL MPSSSSTANN SPTRLKESFI DLNLPAPAED DDLSVVSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-43	C2H2 family protein