PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 31696.6 Da PI: 6.7785 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.3e-19 | 162 | 212 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g XP_027361747.1 162 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 212 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MNTNEPQLHK TETYYGYEMY QQSTYESDLA LLDSIRRHLL GDSDVCRFGA PSVNSGNTPI 60 YCRSSSFSNL YPCLSENWGE LPLKEDDSED MLLYGVLRDA VNVGWVPSLD AGSPESFSSG 120 FLPVETVKSE PDLSPAPEPV FVSPVIPQEK AAPAAVPAKG KHYRGVRQRP WGKFAAEIRD 180 PAKNGARVWL GTFETAEDAA LAYDRAAYRM RGSRALLNFP LRVNSGEPDP VRVTSKRSSP 240 EPSSSSESVS SVKRRKKMVG ATVMGQVGLK TGQVGSQVAQ CTRGEQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-69 | ERF family protein |