PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361646.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 1174aa MW: 130325 Da PI: 6.0479

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.4	1.8e-06	1151	1174	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 +++ C+ f+++G+Ck G++C + H+ XP_027361646.1 1151 GQRVCK-FYESGYCKKGASCDYLHP 1174 6799.8899***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1174 aa Download sequence
MRRMFVSFAS TVEASFSAIA GWHICSACQK AAHYMCYTCT YSLCKGCTKD ADFVCVRENK 60 GLCGVCMRTI MLIENSAQGN KEMCEVDFDD KSSWEYLFKV YWMYLKGKLS LTFDELLQAK 120 NPWKSVAPMG CKIQTPHELY HLKDDKGSGS ENSCIDIESN NSKNNKSKRP QKLLSKGDCF 180 DRVTSGGDSG VSLPECTKWA SKELLEFVAH MKNGDTSLLS QFDVQTLLLE YVKKNNLRDP 240 QQKSQIVCDS RLLNLFGKAR VGHIEMLELL ESHFLLKDNG PVENTFGAGI IDAVASEGEA 300 INNYNKQLAL VSDKRCKTRR KDDVIVPQNN PDAYAAIDTH NINLIYLRQA LMENLTEDIE 360 KIHEKVVGSF VRIRVSSSDQ KQDMHRLVQV VGTSKVAEPY KVGTKATDIK LEILNLNRKE 420 VISIDEISNQ EFAEDECKRL RQSIKYGLSK RLTVGEILDK ALALQAIRVN DLLEAEILRL 480 NHLRDRASEK GHRKELKEYV EKLQLLNSPE ERQRRLHEIP DVHSDPNLDS MFESDEDDGE 540 SDERKKDGNI WSKYLGFDRR ERGPVFPKIW NGVLNDVGCK TQDLPAARQP MGNICVLKNH 600 INHDDTAIDD STKAVPKSEV STVPVDISSS LLSTGLEQPF NDLRSDRSWH YQDPTGKIQG 660 PFSMLQLWNW NKSGHFPPDL RIWKIDDKQD NSILLTDAIS GKCSKTVSLP FNSQLLSLGV 720 SVTLDNKDNS QDAGRNASKN EISSDSQIIE QSREQKVDDT STQSNGKDES VRSNGWQDQL 780 HVFPPLLSTA FPENLNEIPS DKLRKGHGIE GNSEDNGNNG SNRTSDGQSN SGQSYHKQSD 840 SEDNSGQSSG QNWRHTNVNS SSNCLVTTST HVSGTKTSPH KLGFDLHNPP SPPACNTTTW 900 QAIIGEPNDF DESVSDLLAE VEAMESLGGL ESPTSIMKCG EELTEGSKND CLNFAELSPM 960 LDAGKGDALS STADLNLPSQ SSAAEEPLQQ ADVHHHQRIS GEHSSRSSKV EVGTKNVSVS 1020 GNQWESRSEN SPIVPSSATL GLATDTTWRL GSENTHLGWG GIDQGNANMG WGVCQTAVQE 1080 NRSSNSYNSV VTQAFGDSQT RYGSDRFSVP RDRGLQGHGR ESGFGRGRIA YNRQSLFGVG 1140 NGGSYRPLPK GQRVCKFYES GYCKKGASCD YLHP

Sequence ? help Back to Top

Protein Sequence Length: 1174 aa Download sequence

MRRMFVSFAS TVEASFSAIA GWHICSACQK AAHYMCYTCT YSLCKGCTKD ADFVCVRENK  60
GLCGVCMRTI MLIENSAQGN KEMCEVDFDD KSSWEYLFKV YWMYLKGKLS LTFDELLQAK  120
NPWKSVAPMG CKIQTPHELY HLKDDKGSGS ENSCIDIESN NSKNNKSKRP QKLLSKGDCF  180
DRVTSGGDSG VSLPECTKWA SKELLEFVAH MKNGDTSLLS QFDVQTLLLE YVKKNNLRDP  240
QQKSQIVCDS RLLNLFGKAR VGHIEMLELL ESHFLLKDNG PVENTFGAGI IDAVASEGEA  300
INNYNKQLAL VSDKRCKTRR KDDVIVPQNN PDAYAAIDTH NINLIYLRQA LMENLTEDIE  360
KIHEKVVGSF VRIRVSSSDQ KQDMHRLVQV VGTSKVAEPY KVGTKATDIK LEILNLNRKE  420
VISIDEISNQ EFAEDECKRL RQSIKYGLSK RLTVGEILDK ALALQAIRVN DLLEAEILRL  480
NHLRDRASEK GHRKELKEYV EKLQLLNSPE ERQRRLHEIP DVHSDPNLDS MFESDEDDGE  540
SDERKKDGNI WSKYLGFDRR ERGPVFPKIW NGVLNDVGCK TQDLPAARQP MGNICVLKNH  600
INHDDTAIDD STKAVPKSEV STVPVDISSS LLSTGLEQPF NDLRSDRSWH YQDPTGKIQG  660
PFSMLQLWNW NKSGHFPPDL RIWKIDDKQD NSILLTDAIS GKCSKTVSLP FNSQLLSLGV  720
SVTLDNKDNS QDAGRNASKN EISSDSQIIE QSREQKVDDT STQSNGKDES VRSNGWQDQL  780
HVFPPLLSTA FPENLNEIPS DKLRKGHGIE GNSEDNGNNG SNRTSDGQSN SGQSYHKQSD  840
SEDNSGQSSG QNWRHTNVNS SSNCLVTTST HVSGTKTSPH KLGFDLHNPP SPPACNTTTW  900
QAIIGEPNDF DESVSDLLAE VEAMESLGGL ESPTSIMKCG EELTEGSKND CLNFAELSPM  960
LDAGKGDALS STADLNLPSQ SSAAEEPLQQ ADVHHHQRIS GEHSSRSSKV EVGTKNVSVS  1020
GNQWESRSEN SPIVPSSATL GLATDTTWRL GSENTHLGWG GIDQGNANMG WGVCQTAVQE  1080
NRSSNSYNSV VTQAFGDSQT RYGSDRFSVP RDRGLQGHGR ESGFGRGRIA YNRQSLFGVG  1140
NGGSYRPLPK GQRVCKFYES GYCKKGASCD YLHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51120.1	0.0	C3H family protein