PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361583.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 390aa MW: 44571.2 Da PI: 5.218

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.7e-12	186	237	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_027361583.1 186 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 237 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MEKDHNYSAP PSMPPSFNTL DYSLDHHQLH LYPQNQQHQH LMKFQTSDVM QFADFGPKLA 60 LNQAKNCEES GIDPVYFLKF PVLNDDKMEE DQNMMMNNNT DGGDGEAEND AERFNLVSVE 120 DKCRLVGEEG MMREDEETRV SDDNNSVQLR FLGHEDLHKN SSTVQENKNK RKRPRTVKTS 180 EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG DQASIIGGAI EFVRELEQLL 240 QCLESQKRRR LLGEAQARQV GDPTLTAQQP PFFPPLPLPN DQMKLVEMET GLHEETAESK 300 SCLADVEVKL LGFDAMIKIL SRRRPGQLIK TIAALEDLQL IILHTNITTI EQTVLYSFNV 360 KVASDSRFTA EDIASSVQQI FSFIHANTSM

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MEKDHNYSAP PSMPPSFNTL DYSLDHHQLH LYPQNQQHQH LMKFQTSDVM QFADFGPKLA  60
LNQAKNCEES GIDPVYFLKF PVLNDDKMEE DQNMMMNNNT DGGDGEAEND AERFNLVSVE  120
DKCRLVGEEG MMREDEETRV SDDNNSVQLR FLGHEDLHKN SSTVQENKNK RKRPRTVKTS  180
EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG DQASIIGGAI EFVRELEQLL  240
QCLESQKRRR LLGEAQARQV GDPTLTAQQP PFFPPLPLPN DQMKLVEMET GLHEETAESK  300
SCLADVEVKL LGFDAMIKIL SRRRPGQLIK TIAALEDLQL IILHTNITTI EQTVLYSFNV  360
KVASDSRFTA EDIASSVQQI FSFIHANTSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	198	RMTHIAVERNRR
2	247	251	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-126	bHLH family protein