PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361492.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 549aa MW: 60192.6 Da PI: 9.5317

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027361492.1 72 FICEVCNKGFQREQNLQLHRRGH 94 89*******************88 PP
2	zf-C2H2	12	0.00066	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027361492.1 148 WKCDKCSKKYAVQSDWKAHSKTC 170 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MAAPFSAASL FGIREEDQNQ MKQQQHSSTP PSSSTTPAAP PQKKRRNQPG TPNPDAEVIA 60 LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKTTKEPKR KVYLCPEPTC 120 VHHDPSRALG DLTGIKKHYS RKHGEKKWKC DKCSKKYAVQ SDWKAHSKTC GTREYRCDCG 180 TLFSRRDSFI THRAFCDALA QESARQPPNL SSAIGNQIYG NSNISLGLSQ MGPQIPSIHD 240 QNTQSSDLLR FGAARTGQFD HILPPTLASS FRPSHHHTMQ TPSFFMPEPN QNQNYQHDHH 300 QPQQGLVSNK SFQGLIQLSD LNNNINNSPS GSNLFNHPFL SNRASNNNNI VEDQHFNNEG 360 SNFFPESTIL GITDHQTSST TVPSLFSTSL QNSTNNNVSH MSATALLQKA AQMGAASSSS 420 SNNNNPASSL LRNLGSKSDH RPLSTSANYS SIFNNLQDMM NIPGFEVAYD HGMNTREPKL 480 QGVGVNVGGS DRLTRDFLGV GGQNQMVRSM SGGSGGASQQ RGFNLSCSEA ETNNAAPSGQ 540 AFGGGANFQ

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MAAPFSAASL FGIREEDQNQ MKQQQHSSTP PSSSTTPAAP PQKKRRNQPG TPNPDAEVIA  60
LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKTTKEPKR KVYLCPEPTC  120
VHHDPSRALG DLTGIKKHYS RKHGEKKWKC DKCSKKYAVQ SDWKAHSKTC GTREYRCDCG  180
TLFSRRDSFI THRAFCDALA QESARQPPNL SSAIGNQIYG NSNISLGLSQ MGPQIPSIHD  240
QNTQSSDLLR FGAARTGQFD HILPPTLASS FRPSHHHTMQ TPSFFMPEPN QNQNYQHDHH  300
QPQQGLVSNK SFQGLIQLSD LNNNINNSPS GSNLFNHPFL SNRASNNNNI VEDQHFNNEG  360
SNFFPESTIL GITDHQTSST TVPSLFSTSL QNSTNNNVSH MSATALLQKA AQMGAASSSS  420
SNNNNPASSL LRNLGSKSDH RPLSTSANYS SIFNNLQDMM NIPGFEVAYD HGMNTREPKL  480
QGVGVNVGGS DRLTRDFLGV GGQNQMVRSM SGGSGGASQQ RGFNLSCSEA ETNNAAPSGQ  540
AFGGGANFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-106	C2H2 family protein