PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361491.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 558aa MW: 61347 Da PI: 9.5068

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.9e-05	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027361491.1 81 FICEVCNKGFQREQNLQLHRRGH 103 89*******************88 PP
2	zf-C2H2	11.9	0.00067	157	179	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027361491.1 157 WKCDKCSKKYAVQSDWKAHSKTC 179 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAAPFSAASL FGIREEDQNQ MKQQQHSSTP PSSSTTPAAP PQKKRRNQPG TPRMETRNMY 60 ADPDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEPKRK 120 VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG 180 TREYRCDCGT LFSRRDSFIT HRAFCDALAQ ESARQPPNLS SAIGNQIYGN SNISLGLSQM 240 GPQIPSIHDQ NTQSSDLLRF GAARTGQFDH ILPPTLASSF RPSHHHTMQT PSFFMPEPNQ 300 NQNYQHDHHQ PQQGLVSNKS FQGLIQLSDL NNNINNSPSG SNLFNHPFLS NRASNNNNIV 360 EDQHFNNEGS NFFPESTILG ITDHQTSSTT VPSLFSTSLQ NSTNNNVSHM SATALLQKAA 420 QMGAASSSSS NNNNPASSLL RNLGSKSDHR PLSTSANYSS IFNNLQDMMN IPGFEVAYDH 480 GMNTREPKLQ GVGVNVGGSD RLTRDFLGVG GQNQMVRSMS GGSGGASQQR GFNLSCSEAE 540 TNNAAPSGQA FGGGANFQ

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAAPFSAASL FGIREEDQNQ MKQQQHSSTP PSSSTTPAAP PQKKRRNQPG TPRMETRNMY  60
ADPDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEPKRK  120
VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG  180
TREYRCDCGT LFSRRDSFIT HRAFCDALAQ ESARQPPNLS SAIGNQIYGN SNISLGLSQM  240
GPQIPSIHDQ NTQSSDLLRF GAARTGQFDH ILPPTLASSF RPSHHHTMQT PSFFMPEPNQ  300
NQNYQHDHHQ PQQGLVSNKS FQGLIQLSDL NNNINNSPSG SNLFNHPFLS NRASNNNNIV  360
EDQHFNNEGS NFFPESTILG ITDHQTSSTT VPSLFSTSLQ NSTNNNVSHM SATALLQKAA  420
QMGAASSSSS NNNNPASSLL RNLGSKSDHR PLSTSANYSS IFNNLQDMMN IPGFEVAYDH  480
GMNTREPKLQ GVGVNVGGSD RLTRDFLGVG GQNQMVRSMS GGSGGASQQR GFNLSCSEAE  540
TNNAAPSGQA FGGGANFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-102	C2H2 family protein