PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361309.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 327aa MW: 37071.8 Da PI: 4.3721

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.9e-19	86	139	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k XP_027361309.1 86 KKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFK 139 56689***********************************************98 PP
2	HD-ZIP_I/II	129.9	1e-41	86	177	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eqv++LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlEkdy +Lk++yd+lk + e+L +e+++L+ee+++ XP_027361309.1 86 KKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDRLKGDYENLLQENDKLKEEVNS 177 9***************************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAGGKLYGAS NMSLLLQNER LPCSSEVLES LWAHTSNPPS FQGSKSVVDF ENVNGSRVVD 60 RPFFQALEKE ENGDEDYDGC FHQPGKKRRL TSEQVQFLER NFEVENKLEP ERKVQLAKEL 120 GLQPRQVAIW FQNRRARFKT KQLEKDYGTL KASYDRLKGD YENLLQENDK LKEEVNSLKN 180 KLIPRDKEEE NSDDKSSPDA VNSPHKEPMD LISNATSENG SKVSLPIMVT CKQEDANSAK 240 SDVLDSDSPH CTDGNHPSSF VEPADSSHAF EPDQSDFSQD EEDNLSENLL TLPCLPKVED 300 ACYDDPPENS CNFGFQVEDQ TFCFWPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	142	RRARFKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-45	HD-ZIP family protein