PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027361165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 440aa MW: 49847 Da PI: 9.8888 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.1 | 3.4e-07 | 129 | 170 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE +l d+++++ + + Ia +++ Rt +++k+r+++ XP_027361165.1 129 WTKEETNQLFDLCERFDLR-FVIIADRFPSSRTVEELKDRYYS 170 *******************.*********************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 440 aa Download sequence |
MDAKDILGLP KNSFPPLEKK SRPPKESQRK PDGISREVYA LTGGMPPLMP AIEPSQLKKK 60 PHSLEKITWQ WLPFTSSARK DNLQLYHWVR VVNGVPPTGD YSFAKYNKSV DVIKYTDEEY 120 DKYLTDPMWT KEETNQLFDL CERFDLRFVI IADRFPSSRT VEELKDRYYS VSRAILIARA 180 PSSGDVAAHP LVKEPYNVSQ EMERKRALSM VLSQTRQQER RDEEVLVEAK RIAESRIPPK 240 VAEESQLFAS NAGAEFTERT VPGETVSPSN MQLPSMVVPS TLPDNTSTLA SLRMLRVYLR 300 TYALEQMVQA ANSSAGLRTI KRVEQTLQDL GVNLKPRVPT KAVCAEHLEL RKEILTWLNL 360 QKQVQYKEAE GSSFRDGSYG ETPGTPKDRS FIPDPMTFGA MHITLVSVER VGRKDQKRKA 420 PGAPSSSAHK RPRKLKASDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47210.1 | 0.0 | MYB_related family protein |