PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361138.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 279aa    MW: 31831.6 Da    PI: 6.3174
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox573.2e-1876129356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  XP_027361138.1  76 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 129
                     456899***********************************************9 PP
2HD-ZIP_I/II131.92.4e-4275165191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+ eqvk+LE+sFe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+
  XP_027361138.1  75 EKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKSDNDALQTQNQKLQAEI 165
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAFFPANFML QTPHHDDHHP PPSLNSILPS CAPQDYHGGV SFLGKRSMSF SSGIEHGEEV  60
NAEEDLSDDG SQAGEKKRRL NMEQVKTLEK SFELGNKLEP ERKMQLARAL GLQPRQIAIW  120
FQNRRARWKT KQLEKDYDLL KRQYEAIKSD NDALQTQNQK LQAEILALKS REPTESINLN  180
KETEGSCSNR SENSSEIKLD ISRTPAIDSP LSTHQPSRTL FPSSARPTAV AQLFQTSSRP  240
ELQCQKIDQM VKEESLSNMF CAMDDQSGFW PWLEQQHFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124132RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-122HD-ZIP family protein