PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361001.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 371aa MW: 41220.8 Da PI: 7.1203

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.4e-11	97	146	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f+eL l ++ +K++Ka+iL+++v+ +k+L XP_027361001.1 97 RKVQKADREKLRRDRLNEHFQELGNTLDPD----RPKNDKATILTETVQMLKDL 146 5677889******************997....79**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGSALARGRH TLDASLSLSL SLSLSGMRFR LGPFLDNSNQ HIPHSNAKMD QWKPQDSASD 60 SASQHVTVNP NRFRNSQLSR ERERGEGGEG EDPSAARKVQ KADREKLRRD RLNEHFQELG 120 NTLDPDRPKN DKATILTETV QMLKDLTAEV NRLKKEHKAL SEESRELMQE KNELREEKTS 180 LKSEIESLNG QYEQRVRIMF PWTAIDHSVV MSSPYSYPVP IPISPGPISI HPALQPFPFF 240 GNQNPGHVPN PCSMYVPYPT PTNPLGEIPP AQYASTSVSN QKESPSKSPI YRRPIDAERC 300 STSHDVATEL ELKMPGSSST QQDCSSGERK GKHSVMKDKI ITDGSASSQY SSSQGLQDSS 360 NSVGDNPKTD N

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGSALARGRH TLDASLSLSL SLSLSGMRFR LGPFLDNSNQ HIPHSNAKMD QWKPQDSASD  60
SASQHVTVNP NRFRNSQLSR ERERGEGGEG EDPSAARKVQ KADREKLRRD RLNEHFQELG  120
NTLDPDRPKN DKATILTETV QMLKDLTAEV NRLKKEHKAL SEESRELMQE KNELREEKTS  180
LKSEIESLNG QYEQRVRIMF PWTAIDHSVV MSSPYSYPVP IPISPGPISI HPALQPFPFF  240
GNQNPGHVPN PCSMYVPYPT PTNPLGEIPP AQYASTSVSN QKESPSKSPI YRRPIDAERC  300
STSHDVATEL ELKMPGSSST QQDCSSGERK GKHSVMKDKI ITDGSASSQY SSSQGLQDSS  360
NSVGDNPKTD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-67	bHLH family protein