PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027360836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | AP2 | ||||||||
Protein Properties | Length: 495aa MW: 54598.4 Da PI: 8.7153 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 152 | 201 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027360836.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 201 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.2e-14 | 244 | 294 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_027360836.1 244 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 294 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MWDLNDSPDQ RKDYESEGCS SLKEGDDDKG KRVGSVSNSS SSAVVIEDGS EEEDGDRGGS 60 RTFKKKSSKI FGFSVTHHDS DRPPVTVTRQ FFPVEDSDVA LPSGGGGTSN SFPRAHWVGV 120 KFCQSETLGA GKSVEVSQPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR AYDRAAIKFR GVEADINFNI EDYEDDLKQM SNLTKEEFVH VLRRQSTGFP 240 RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEIE AARAYDKAAI KCNGKEAVTN 300 FDPSIYDKEL NSESSGVAAD HNLDLSLGNS SSKHSSSQAL GNQPPNSSTD QHMALESNWR 360 NGGSKPKVHL VNILPKPCGR SNMEAYARDG QGESEALRLL SQTRLHSPPT NEMHRYGPYR 420 SPAEPPQMPQ NFVSSSSNGG RIGSDLSLSM SEQQWQPGPP HLLATAAASS GFPPQIRPSQ 480 GWLQKNGFHT LMRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-129 | AP2 family protein |