PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360178.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GATA

Protein Properties

Length: 544aa MW: 60172.7 Da PI: 7.3038

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.9	4.3e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_027360178.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDDYVDQ 60 RVSRVKSISL NKNKEVTLLK RKHNYDNVVS GGFAPDYNQG FQKAVIEEDT SNRSSSGSAI 120 SNSESCAQFG GMDASDLTGP AQSVVWDAMV PSKKRTCVGR PKPSSVEKLT KDLCTILHEQ 180 QSYFSASSEE DLLFESDTPM VSVEIGHGSV LIRHPSYIAR EEESEASSLS VDNRQCPMSE 240 AYSGAILMRN DSSHTSQVIE KIRNFVGQGM QQEQLKSDKS HLERILGNHE SPLCLIDLQD 300 VVNYEEFLRI LTNEEQQRLL KLLPMVDTAK LPDSLKVMFN SSQFKENLTY FQQLLAEGVF 360 DISLLGAKPE DCKTLKRLAL SNLSKSKWVE HYNFLKLQRR KNRVGKSSTM GSTGTASTSV 420 ANGKASTNVA NIKRMRDSRN QNFPELKTIM RSPKRVISKG GCEGKQAVED GACYSPKSLF 480 ALPPDASSLL LDSLNFDEES GDQDLLLEVP SNTSFPQAEL LHPTLSLAAQ TSTSSNSVYS 540 HLQH

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDDYVDQ  60
RVSRVKSISL NKNKEVTLLK RKHNYDNVVS GGFAPDYNQG FQKAVIEEDT SNRSSSGSAI  120
SNSESCAQFG GMDASDLTGP AQSVVWDAMV PSKKRTCVGR PKPSSVEKLT KDLCTILHEQ  180
QSYFSASSEE DLLFESDTPM VSVEIGHGSV LIRHPSYIAR EEESEASSLS VDNRQCPMSE  240
AYSGAILMRN DSSHTSQVIE KIRNFVGQGM QQEQLKSDKS HLERILGNHE SPLCLIDLQD  300
VVNYEEFLRI LTNEEQQRLL KLLPMVDTAK LPDSLKVMFN SSQFKENLTY FQQLLAEGVF  360
DISLLGAKPE DCKTLKRLAL SNLSKSKWVE HYNFLKLQRR KNRVGKSSTM GSTGTASTSV  420
ANGKASTNVA NIKRMRDSRN QNFPELKTIM RSPKRVISKG GCEGKQAVED GACYSPKSLF  480
ALPPDASSLL LDSLNFDEES GDQDLLLEVP SNTSFPQAEL LHPTLSLAAQ TSTSSNSVYS  540
HLQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-155	GATA family protein