PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360056.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 495aa MW: 54690 Da PI: 4.7362

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	8.9e-36	24	115	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws+++nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll+ XP_027360056.1 24 FLSKTYDMVDDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLRG 109 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_027360056.1 110 ITRRKP 115 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MDSGGGGGST PAAAIPNANA PPPFLSKTYD MVDDPSTDAI VSWSATNNSF VVWDPPEFAR 60 DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL RGQKHLLRGI TRRKPAHGQN 120 HQQAQQPHGQ GSSVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QTTDNQLQAM 180 VQRLQGMEQR QQQMMSFLAK AVQSPGFFAQ FVQQQNDSSR RISEVNKKRR LKQEGVAETE 240 RATAPDGQIV KYQPPVNEAA KAMLRQFMKW DASRVEPFNK NSDNYLIGDG SSPPSAMDSS 300 SPSSWTSGVT LQEVPPTSVQ SSHIPAATGT QGHFPSICKP ETLSVPQAMA SDQVKKDGAH 360 DAPCIPVSQA DVVMPDLPPI TEMMTGNILD IPEENYMAPE TDEGYMDPNS LGVGGSFPID 420 FEGISPDADI DDFLNNPSIW DDLLQTPVPE ELETSVAEVS KGNEVQPTKN GWDKTQHMDQ 480 LTEQMGLLSS DAKRV

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MDSGGGGGST PAAAIPNANA PPPFLSKTYD MVDDPSTDAI VSWSATNNSF VVWDPPEFAR  60
DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL RGQKHLLRGI TRRKPAHGQN  120
HQQAQQPHGQ GSSVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QTTDNQLQAM  180
VQRLQGMEQR QQQMMSFLAK AVQSPGFFAQ FVQQQNDSSR RISEVNKKRR LKQEGVAETE  240
RATAPDGQIV KYQPPVNEAA KAMLRQFMKW DASRVEPFNK NSDNYLIGDG SSPPSAMDSS  300
SPSSWTSGVT LQEVPPTSVQ SSHIPAATGT QGHFPSICKP ETLSVPQAMA SDQVKKDGAH  360
DAPCIPVSQA DVVMPDLPPI TEMMTGNILD IPEENYMAPE TDEGYMDPNS LGVGGSFPID  420
FEGISPDADI DDFLNNPSIW DDLLQTPVPE ELETSVAEVS KGNEVQPTKN GWDKTQHMDQ  480
LTEQMGLLSS DAKRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	233	NKKRRLKQ
2	227	232	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-130	HSF family protein