PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027360045.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 784aa    MW: 87549.3 Da    PI: 6.0306
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027360045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.6e-2084139156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_027360045.1  84 KKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMK 139
                     688899***********************************************998 PP
2START151.67e-482845082206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv............dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                     la + ++elvk+ + +ep+W +ss  en+ evl   e ++              ++ea+r+++vv+m++++lv  +ld   +W e ++    +a+
  XP_027360045.1 284 LAASSMAELVKMCQTNEPLWIRSS--ENEREVLNFDEHARLfswplnlkhrseLRTEASRDTAVVIMNSVTLVDAFLDPQ-KWMELFPtivsRAK 375
                     78899*******************..9999999988777779***********************************999.9*999999999*** PP

                     EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
           START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                     +++ issg      g+lqlm+ae+q+lsplv+ R+  f+Ry++q  ++g+w+ivd  vd   ++  ++s+ R  ++ Sg++i++++ng+s+vtwv
  XP_027360045.1 376 IVQIISSGasghasGTLQLMYAEFQVLSPLVStRETHFLRYCQQnAEEGTWAIVDFPVDTFHHNF-HPSYPRYYRRSSGCVIQDMPNGYSRVTWV 469
                     ***************************************************************99.9**************************** PP

                     E-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 168 ehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     eh+ ++++ +h+++   v +g+a+ga++w+  lqrqce+
  XP_027360045.1 470 EHAKVEEKPVHQIFCNYVYNGMAFGARRWLGVLQRQCER 508
                     *************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 784 aa     Download sequence    
MYGDCQVMST MGGNVVVNSD TLFSSSIQNS NFNFIPTMPF QPFPTMKEED GILRGKEEMD  60
SGSGSEHVED KSGNEQESEQ PTKKKRYHRH TARQIQEMEA LFKECPHPDD KQRLKLSHEL  120
GLKPRQVKFW FQNRRTQMKA QQDRADNVIL RAENETLKNE NYRLQAALRN IICPNCGGPC  180
IMGADLGLDE QQLRLENARL REELERVCCL TSRYTGRPIQ TMTAAPTLMA PSLDLDMNIY  240
PRHFTDPLAH CAEMIPVPML PPEASPFAED GVLMEEEKSL ALELAASSMA ELVKMCQTNE  300
PLWIRSSENE REVLNFDEHA RLFSWPLNLK HRSELRTEAS RDTAVVIMNS VTLVDAFLDP  360
QKWMELFPTI VSRAKIVQII SSGASGHASG TLQLMYAEFQ VLSPLVSTRE THFLRYCQQN  420
AEEGTWAIVD FPVDTFHHNF HPSYPRYYRR SSGCVIQDMP NGYSRVTWVE HAKVEEKPVH  480
QIFCNYVYNG MAFGARRWLG VLQRQCERVA SLMARNISDL GVIPSPEARK NLMKLAQRMI  540
KTFSLNMSTS GGQSWTAISD SPEDTVRITT RKITEPGQPN GVILSAVSTT WLPYSHTKVF  600
DLLRDERHRS QMDALSNGNS LNEVAHIANG SHPGNCISLL RINVASNSSQ NVELMLQESC  660
TDQCGSLVVY TTIDVDSIQL AMSGEDPSCI ALLPQGFMIV PMVSSSGNDD ANSSANSGCL  720
LTMGLQVLAS TIPSAKLNLS SVTAINNHLC NTLHQIEASL SSCHENGTFV GSCTEPTTSA  780
PSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein