PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359983.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 264aa    MW: 29711.4 Da    PI: 8.1984
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.1e-19119173256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Le+ F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_027359983.1 119 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 173
                     788899***********************************************98 PP
2HD-ZIP_I/II125.52.4e-40119208191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLE+sF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
  XP_027359983.1 119 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELK-AL 208
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGLDQDDNNS GLQLVLGLSL TPTPTKPYNN SSNEPSLTLS LSGESNYLAK QVTRNNKVYC  60
EDPLDLSRQT SPHSVVSSFS SGRMVKRERD FSCEEAEAEA EERLSSRVSD EDEDGSNARK  120
KLRLTKEQSA LLEDSFKQHS TLNPKQKQAL ARQLNLRPRQ VEVWFQNRRA RTKLKQTEVD  180
CEFLKKCCET LTDENRRLKK ELQELKALKL SQPLYMPMPA ATLTMCPSCE RLGGVNDSGS  240
NKSPFSMAPK THFYNPFANP SAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168176RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-89HD-ZIP family protein