PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359944.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 542aa MW: 59083.7 Da PI: 9.6272

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.4e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027359944.1 74 FICELCNKGFQREQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	12	0.00065	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027359944.1 150 WKCDKCSKKYAVQSDWKAHSKTC 172 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MAAASSSTPF LGIRQENQSQ IAQHHQSSTA ASSTTTTTPT TVPQKKRRNQ PGTPYPDAEV 60 IALSPKTLMA TNRFICELCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEP KRKVYLCPEP 120 TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCDKCSKKYA VQSDWKAHSK TCGTREYRCD 180 CGTLFSRRDS FITHRAFCDA LAHESARHPS NLNPLGTHLY GTNHMNLGLG TQLQNQASTN 240 SILSLGSAPK FEHLVSPNLH HSSSFGVQSP QSSFFMTDPS QAFHDLQSQQ QGSLFSSNKQ 300 LHGLMQLPDL QGTTNNSTSA SSVSANSANT NFFNLSFFPN TNSSGSIIND QFNNLGGGNN 360 QGTTTLYSTN SPVSNQVGSG LSSLFGNSSV QQENMSPHMS ATALLQKAAQ MGSTTTTNGA 420 EELGVRSSME NMHNNHLRGL INSLANGNTS IFGNVKGNEN NLSQFHNVVE EPKKLSQNLG 480 VCFGGSDKLT LDFLGVGGMV RNMSSGGFSQ REQQHSMGTM TPLDTKLESA QANQPYGTST 540 LQ

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MAAASSSTPF LGIRQENQSQ IAQHHQSSTA ASSTTTTTPT TVPQKKRRNQ PGTPYPDAEV  60
IALSPKTLMA TNRFICELCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEP KRKVYLCPEP  120
TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCDKCSKKYA VQSDWKAHSK TCGTREYRCD  180
CGTLFSRRDS FITHRAFCDA LAHESARHPS NLNPLGTHLY GTNHMNLGLG TQLQNQASTN  240
SILSLGSAPK FEHLVSPNLH HSSSFGVQSP QSSFFMTDPS QAFHDLQSQQ QGSLFSSNKQ  300
LHGLMQLPDL QGTTNNSTSA SSVSANSANT NFFNLSFFPN TNSSGSIIND QFNNLGGGNN  360
QGTTTLYSTN SPVSNQVGSG LSSLFGNSSV QQENMSPHMS ATALLQKAAQ MGSTTTTNGA  420
EELGVRSSME NMHNNHLRGL INSLANGNTS IFGNVKGNEN NLSQFHNVVE EPKKLSQNLG  480
VCFGGSDKLT LDFLGVGGMV RNMSSGGFSQ REQQHSMGTM TPLDTKLESA QANQPYGTST  540
LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-105	C2H2 family protein