PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359856.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 890aa MW: 98352.4 Da PI: 4.5504

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.4	1.2e-11	741	784	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+W++++ el+++av+q+G++ ++ I + ++ +t+ q+k+++ k XP_027359856.1 741 RGKWSKQDTELFYEAVRQFGTD-FSMIQQLFP-DKTRHQIKLKYKK 784 89******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MDPFDDIAPV APSRPGLKFM PKAKLKQLPR KEISVLDHAT SSTTFSDRPQ VEIPNSEDAT 60 NPKTKNSQQV SAKGHTVALV DDHLHSTIAA SDIDQIFTNF PRSASEAGPV DFEVGSGTNI 120 IPQTNLNTEN ELNNVTAPCT TCSIIDGTQE PPKNGEGSFL DSSKCLELVD NSLQVETDVG 180 FKSDSDNKVA IFESNIQSKS NFGREQEVVS AEFELDPFSN VLPDPGARNA RKFQPKIKPR 240 PRVGNSAANA SSSSNVMTEK SVELPNSCMN EFQSNGDGSD RLNQSTSLPL PSQILRTTDL 300 PNKPDYMSPS IPFSEDNTGL APVIPSQLDS LNAMLLEVAT HNGTRDWPSS FGKSSGEAAD 360 IFSGLESLDD FLTQAASDTG KPALHSFNEK GTDENFVNHN CRSINSFGVC DTTQVQRCPM 420 YQTTQDSITF NEAAVLNEDD THTNNRRLET KEVVDLNPAC PGDDVFEYQS MKSGTDPTSE 480 TPVHEELTNA ADSPTLADFL HADVAREKDA NERTKDGSIS SSSRKNKRSS IIGEEDNDGN 540 TSRQLRKQTA HKPTNSSLND DVEDDDNLDA NGDELEENGD DHEVDYSSKK GRASTSSKKK 600 SGAKNGKTTQ KRKRANDDLE KTIKEPPKKF SHSTQRRKRT VDKALLEIPE DELDPRTLPI 660 KDIILLAEYR ERLAKKEGTP QTTSTYQSGG DFLHEASANY EEEEIFGSED GRDPDDDRAN 720 GRIPSASSLF NYQSFMEKAP RGKWSKQDTE LFYEAVRQFG TDFSMIQQLF PDKTRHQIKL 780 KYKKEERQHP LRLSDAVNNR AKDHSHFKLV IERLELASTK AEDDPSRDAS DFMMGEEVTD 840 LTPGTNEEVA TTEQGADVKA QEDSAAVHSP EQSDDSDDDF QKWAQYKSAY

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MDPFDDIAPV APSRPGLKFM PKAKLKQLPR KEISVLDHAT SSTTFSDRPQ VEIPNSEDAT  60
NPKTKNSQQV SAKGHTVALV DDHLHSTIAA SDIDQIFTNF PRSASEAGPV DFEVGSGTNI  120
IPQTNLNTEN ELNNVTAPCT TCSIIDGTQE PPKNGEGSFL DSSKCLELVD NSLQVETDVG  180
FKSDSDNKVA IFESNIQSKS NFGREQEVVS AEFELDPFSN VLPDPGARNA RKFQPKIKPR  240
PRVGNSAANA SSSSNVMTEK SVELPNSCMN EFQSNGDGSD RLNQSTSLPL PSQILRTTDL  300
PNKPDYMSPS IPFSEDNTGL APVIPSQLDS LNAMLLEVAT HNGTRDWPSS FGKSSGEAAD  360
IFSGLESLDD FLTQAASDTG KPALHSFNEK GTDENFVNHN CRSINSFGVC DTTQVQRCPM  420
YQTTQDSITF NEAAVLNEDD THTNNRRLET KEVVDLNPAC PGDDVFEYQS MKSGTDPTSE  480
TPVHEELTNA ADSPTLADFL HADVAREKDA NERTKDGSIS SSSRKNKRSS IIGEEDNDGN  540
TSRQLRKQTA HKPTNSSLND DVEDDDNLDA NGDELEENGD DHEVDYSSKK GRASTSSKKK  600
SGAKNGKTTQ KRKRANDDLE KTIKEPPKKF SHSTQRRKRT VDKALLEIPE DELDPRTLPI  660
KDIILLAEYR ERLAKKEGTP QTTSTYQSGG DFLHEASANY EEEEIFGSED GRDPDDDRAN  720
GRIPSASSLF NYQSFMEKAP RGKWSKQDTE LFYEAVRQFG TDFSMIQQLF PDKTRHQIKL  780
KYKKEERQHP LRLSDAVNNR AKDHSHFKLV IERLELASTK AEDDPSRDAS DFMMGEEVTD  840
LTPGTNEEVA TTEQGADVKA QEDSAAVHSP EQSDDSDDDF QKWAQYKSAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	598	614	KKKSGAKNGKTTQKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-45	MYB_related family protein