PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26102.7 Da PI: 6.6032 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.8e-21 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa+a++aa++k++g XP_027359224.1 41 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAAAYDAAALKFKG 90 8********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MSTNNSSLFP VSPGQINTSQ FINSQDPPQP IHQGNNERKK HYRGVRQRPW GKWAAEIRDP 60 KKAARVWLGT FDTAEAAAAA YDAAALKFKG NKAKLNFPEL AALPTDSSTA INASVSSQSA 120 SLPPHVGDQS QQPATLPMPL SEEGFPNLMQ YAQVLCSRDD DDLQRAASGL YYHHHHHNEP 180 FLYGSSQPPF FLSSSSSAMP MSTSKTVVPD DQWVDGGHDS SWVFDQGGSG FDESNRRGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-33 | ERF family protein |