PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359088.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 444aa MW: 50830.4 Da PI: 6.4328

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.9	2.1e-26	120	215	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84 +Wt+++v++Li+a+++++e+ ++ +kk++W++vsk+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d XP_027359088.1 120 KWTDKMVRLLITAVSYIGEDGTSDGgsgrrkfavlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLDV 214 7************99999998644566778888********************************************56999988888776 PP trihelix 85 l 85 + XP_027359088.1 215 I 215 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MEGNLSQGGM IQGGGSFGGF EMPGSMRVHR QAQHSHAMNQ HQTHPCQGSS VHSSVHDGFP 60 LTMGTMQSCD QTVSMTEFSQ GDRNKNSPSE EDEPSFAEEG VDGHHEAGRG RKGSPWQRVK 120 WTDKMVRLLI TAVSYIGEDG TSDGGSGRRK FAVLQKKGKW KSVSKVMAER GYHVSPQQCE 180 DKFNDLNKRY KKLNDMLGRG TSCQVVENPA LLDVIDYLSE KEKDDVRKIL SSKHLFYEEM 240 CSYHNGNRLH LPHDPALQRS LQLALRNRDD HDDDIRRSYH DDHDEDDQDM ETDDHDDFEE 300 NYASHGENRG IFGTSGGSMK RLKHGQGQED TITFGSALNS QEYNKSSYPQ MVQSDVNQAL 360 PENMKAAWVQ KQWFESRSLQ LEEQKLQIQV ELLELEKQKF KWQKFSKKKD RELEKLKLEN 420 ERMKVENERI ALELKRKEMG TGFN

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MEGNLSQGGM IQGGGSFGGF EMPGSMRVHR QAQHSHAMNQ HQTHPCQGSS VHSSVHDGFP  60
LTMGTMQSCD QTVSMTEFSQ GDRNKNSPSE EDEPSFAEEG VDGHHEAGRG RKGSPWQRVK  120
WTDKMVRLLI TAVSYIGEDG TSDGGSGRRK FAVLQKKGKW KSVSKVMAER GYHVSPQQCE  180
DKFNDLNKRY KKLNDMLGRG TSCQVVENPA LLDVIDYLSE KEKDDVRKIL SSKHLFYEEM  240
CSYHNGNRLH LPHDPALQRS LQLALRNRDD HDDDIRRSYH DDHDEDDQDM ETDDHDDFEE  300
NYASHGENRG IFGTSGGSMK RLKHGQGQED TITFGSALNS QEYNKSSYPQ MVQSDVNQAL  360
PENMKAAWVQ KQWFESRSLQ LEEQKLQIQV ELLELEKQKF KWQKFSKKKD RELEKLKLEN  420
ERMKVENERI ALELKRKEMG TGFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-144	Trihelix family protein