PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359062.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 725aa    MW: 80145.1 Da    PI: 6.8114
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.46.5e-202782156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+++Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_027359062.1 27 KKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 82
                    678899***********************************************998 PP
2START181.35.5e-572274512206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a++el+++ + +ep+W kss    + +n d++ + f+++++       ++ea+r+sgvv+m+  +lv  ++d + +W e ++     a t+
  XP_027359062.1 227 IASNAMEELIRLLQTNEPLWIKSSadgrDVLNLDTYERMFPKTNShlknpnVRIEASRDSGVVIMNGLTLVDMFMDPN-KWMELFPtivtMARTI 320
                     67899***********************99**********999999****99**************************.999999999999**** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      g lqlm+ elq+lsplv+ R+f+f+Ry++q ++g w+ivdvS d +q+++  ++  R+++lpSg+ i++++ng+skvtw+ehv
  XP_027359062.1 321 EVISSGmmgghsGSLQLMYEELQVLSPLVStREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQ-FAPQFRSHRLPSGCFIQDMPNGYSKVTWIEHV 414
                     *************************************************************9.8******************************* PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     + +++ p h l+r ++ sg+a+ga++w+ tlqr ce+
  XP_027359062.1 415 EIEDKNPvHRLYRNIIYSGMAFGAQRWLTTLQRMCER 451
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
MEYGSGGSGS PGDHHHHHDG SDSQRRKKRY HRHTANQIQR LESMFKECPH PDEKQRLQLS  60
RELGLAPRQI KFWFQNRRTQ MKAQHERADN CALRAENDKI RCENIAIREA LKNVICPSCG  120
GPPINEDSYF DEQKLRLENA QLKEELDRVS SIAAKYIGRP ISQLPPVQPI HISSLDLSMG  180
SFGSQGLGGP SLDLDLLPGS SSSSMPNVPP YQPACLSDMD KSLMSDIASN AMEELIRLLQ  240
TNEPLWIKSS ADGRDVLNLD TYERMFPKTN SHLKNPNVRI EASRDSGVVI MNGLTLVDMF  300
MDPNKWMELF PTIVTMARTI EVISSGMMGG HSGSLQLMYE ELQVLSPLVS TREFYFLRYC  360
QQIEQGLWAI VDVSYDFPQD NQFAPQFRSH RLPSGCFIQD MPNGYSKVTW IEHVEIEDKN  420
PVHRLYRNII YSGMAFGAQR WLTTLQRMCE RLACLMVTGN STRDLGGVIP SPEGKRSMMK  480
LAQRMVTNFC TSISASPGHR WTTLSGLNEI GVRVTVHKST DPGQPNGVVL SAATTIWLPI  540
PPQTVFNFFK DERKRPQWDV LSNGNAVQEV AHIANGSHPG NCISVLRAFN TSQNNMLILQ  600
ESCVDSSGSL VVYCPVDLPA INIAMSGEDP SYIPLLPSGF TISPDGQQDQ EGVGVGVGGA  660
STSTNTNRIM GCGSSSSGSL ITVAFQILVS SLPSAKLNME SVTTVNSLIG NTVQQIKAAL  720
NCPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein