PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358917.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 357aa MW: 39253.7 Da PI: 5.6561

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.7	3.5e-06	19	59	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 r+C+++ + + +C+ ++ +lC +C +H H+ XP_027358917.1 19 RVCDTCRSAACIVYCHADSAYLCSTCDARIHAAnrvasrHE 59 68****99*******************5555666676 PP
2	zf-B_box	28.7	2.7e-09	61	106	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C +H+ H +vp+ XP_027358917.1 61 VWVCEACERAPAAFLCKADAASLCSSCDADIHSAnplasrHHRVPI 106 689*****************************66899999877775 PP
3	CCT	70.2	5.1e-24	298	341	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeKkirY+sRKa+Ae+RpR+KGrF+k++ XP_027358917.1 298 REARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRT 341 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MLKEGTANNS GGGTTNWSRV CDTCRSAACI VYCHADSAYL CSTCDARIHA ANRVASRHER 60 VWVCEACERA PAAFLCKADA ASLCSSCDAD IHSANPLASR HHRVPILPII GLLFGEQEHG 120 FMNEVEEEEN EEGVVCEDED VAEAASWLLP NPVKNDELGE EENGFLFGDE YLELVDHCNS 180 CGHNNNQFSD VGFGDHHQNY NTVAHHQNYA VVPVQCGGEV VGQVQHHFQP GLDFDSSKAG 240 FSYDGSLSQS VSVSSMDVGV VPESTISDIS ISHSKSPIGT SDLFPPLPMP SHLTPMDREA 300 RVLRYREKKK TRKFEKKIRY ASRKAYAETR PRIKGRFAKR TDTTLITEAG CSIVPSF

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MLKEGTANNS GGGTTNWSRV CDTCRSAACI VYCHADSAYL CSTCDARIHA ANRVASRHER  60
VWVCEACERA PAAFLCKADA ASLCSSCDAD IHSANPLASR HHRVPILPII GLLFGEQEHG  120
FMNEVEEEEN EEGVVCEDED VAEAASWLLP NPVKNDELGE EENGFLFGDE YLELVDHCNS  180
CGHNNNQFSD VGFGDHHQNY NTVAHHQNYA VVPVQCGGEV VGQVQHHFQP GLDFDSSKAG  240
FSYDGSLSQS VSVSSMDVGV VPESTISDIS ISHSKSPIGT SDLFPPLPMP SHLTPMDREA  300
RVLRYREKKK TRKFEKKIRY ASRKAYAETR PRIKGRFAKR TDTTLITEAG CSIVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	3e-68	CO-like family protein