PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358852.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 660aa MW: 73610.1 Da PI: 7.9193

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00022	81	102	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027358852.1 81 KCDKCSREFCSSINYRRHIRVH 102 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN 60 NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG 120 AYWDKEVQGS SILNALTSLV RKQGFSPLPQ YYLRAGAALL DIVQSKPSSF PISSQELFST 180 LDDASEKTCL WGTAVSMQRY VFDGEAGKIG LEPKNLVACT SFLLEQKLVK AWLADKDAEA 240 LKCQKQLVEE EEAAQKRQAE ILERKRQKKL RQKEQKAREQ RGKDETEIKG NTASTVKALS 300 PEEASLDTYN FPENALSHVP FQCPETSEGI DGETDTHSGY EFVTDQNIGR QSAHGQNHQH 360 IAVARWQQGL PKSQWAVANA LHTNQNSQIS KVDLIQKHGT HRDSSKVWSR KPKTEIDKVV 420 LKTIIEGESN QVKNHEVLIG SISVNLGNSN QLEGNMVASQ EDCMVENVAK QNSFQDKPTK 480 PDFVTCGNNR LTVKCWRPVS RLETKDPSPV QRGETDVDAL HGNGGGQNLS GPSCLGLCSV 540 DGNDIGFEND FSHLEGRVDP GSLRFSSCAA KAFLAQRWKE AILSDHVTLV VSHDSEPPGC 600 QEIQDFKIAE CQSSDVDKCN IPAIAENTLP GTTRVTKSKP RLKSEKGTKI KYIPKRMTTT

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN  60
NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG  120
AYWDKEVQGS SILNALTSLV RKQGFSPLPQ YYLRAGAALL DIVQSKPSSF PISSQELFST  180
LDDASEKTCL WGTAVSMQRY VFDGEAGKIG LEPKNLVACT SFLLEQKLVK AWLADKDAEA  240
LKCQKQLVEE EEAAQKRQAE ILERKRQKKL RQKEQKAREQ RGKDETEIKG NTASTVKALS  300
PEEASLDTYN FPENALSHVP FQCPETSEGI DGETDTHSGY EFVTDQNIGR QSAHGQNHQH  360
IAVARWQQGL PKSQWAVANA LHTNQNSQIS KVDLIQKHGT HRDSSKVWSR KPKTEIDKVV  420
LKTIIEGESN QVKNHEVLIG SISVNLGNSN QLEGNMVASQ EDCMVENVAK QNSFQDKPTK  480
PDFVTCGNNR LTVKCWRPVS RLETKDPSPV QRGETDVDAL HGNGGGQNLS GPSCLGLCSV  540
DGNDIGFEND FSHLEGRVDP GSLRFSSCAA KAFLAQRWKE AILSDHVTLV VSHDSEPPGC  600
QEIQDFKIAE CQSSDVDKCN IPAIAENTLP GTTRVTKSKP RLKSEKGTKI KYIPKRMTTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	270	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-119	C2H2 family protein