PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358851.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 671aa MW: 74938.7 Da PI: 7.3498

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	74	95	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027358851.1 74 KCDKCSREFCSSINYRRHIRVH 95 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQEFP 60 GWPLLSPLKV QLQKCDKCSR EFCSSINYRR HIRVHHRLKK LDKDYTKTRD LLGAYWDKLS 120 VEEAKEVVSF ENVMLEEVQG SSILNALTSL VRKQGFSPLP QYYLRAGAAL LDIVQSKPSS 180 FPISSQELFS TLDDASEKTC LWGTAVSMQR YVFDGEAGKI GLEPKNLVAC TSFLLEQKLV 240 KAWLADKDAE ALKCQKQLVE EEEAAQKRQA EILERKRQKK LRQKEQKARE QRGKDETEIK 300 GNTASTVKAL SPEEASLDTY NFPENALSHV PFQCPETSEG IDGETDTHSG YEFVTDQNIG 360 RQSAHGQNHQ HIAVARWQQG LPKSQWAVAN ALHTNQNSQI SKVDLIQKHG THRDSSKVWS 420 RKPKTEIDKV VLKTIIEGES NQVKNHEVLI GSISVNLGNS NQLEGNMVAS QEDCMVENVA 480 KQNSFQDKPT KPDFVTCGNN RLTVKCWRPV SRLETKDPSP VQRGETDVDA LHGNGGGQNL 540 SGPSCLGLCS VDGNDIGFEN DFSHLEGRVD PGSLRFSSCA AKAFLAQRWK EAILSDHVTL 600 VVSHDSEPPG CQEIQDFKIA ECQSSDVDKC NIPAIAENTL PGTTRVTKSK PRLKSEKGTK 660 IKYIPKRMTT T

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQEFP  60
GWPLLSPLKV QLQKCDKCSR EFCSSINYRR HIRVHHRLKK LDKDYTKTRD LLGAYWDKLS  120
VEEAKEVVSF ENVMLEEVQG SSILNALTSL VRKQGFSPLP QYYLRAGAAL LDIVQSKPSS  180
FPISSQELFS TLDDASEKTC LWGTAVSMQR YVFDGEAGKI GLEPKNLVAC TSFLLEQKLV  240
KAWLADKDAE ALKCQKQLVE EEEAAQKRQA EILERKRQKK LRQKEQKARE QRGKDETEIK  300
GNTASTVKAL SPEEASLDTY NFPENALSHV PFQCPETSEG IDGETDTHSG YEFVTDQNIG  360
RQSAHGQNHQ HIAVARWQQG LPKSQWAVAN ALHTNQNSQI SKVDLIQKHG THRDSSKVWS  420
RKPKTEIDKV VLKTIIEGES NQVKNHEVLI GSISVNLGNS NQLEGNMVAS QEDCMVENVA  480
KQNSFQDKPT KPDFVTCGNN RLTVKCWRPV SRLETKDPSP VQRGETDVDA LHGNGGGQNL  540
SGPSCLGLCS VDGNDIGFEN DFSHLEGRVD PGSLRFSSCA AKAFLAQRWK EAILSDHVTL  600
VVSHDSEPPG CQEIQDFKIA ECQSSDVDKC NIPAIAENTL PGTTRVTKSK PRLKSEKGTK  660
IKYIPKRMTT T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	274	281	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-131	C2H2 family protein