PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358849.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 678aa MW: 75644.4 Da PI: 7.3498

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	81	102	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027358849.1 81 KCDKCSREFCSSINYRRHIRVH 102 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN 60 NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG 120 AYWDKLSVEE AKEVVSFENV MLEEVQGSSI LNALTSLVRK QGFSPLPQYY LRAGAALLDI 180 VQSKPSSFPI SSQELFSTLD DASEKTCLWG TAVSMQRYVF DGEAGKIGLE PKNLVACTSF 240 LLEQKLVKAW LADKDAEALK CQKQLVEEEE AAQKRQAEIL ERKRQKKLRQ KEQKAREQRG 300 KDETEIKGNT ASTVKALSPE EASLDTYNFP ENALSHVPFQ CPETSEGIDG ETDTHSGYEF 360 VTDQNIGRQS AHGQNHQHIA VARWQQGLPK SQWAVANALH TNQNSQISKV DLIQKHGTHR 420 DSSKVWSRKP KTEIDKVVLK TIIEGESNQV KNHEVLIGSI SVNLGNSNQL EGNMVASQED 480 CMVENVAKQN SFQDKPTKPD FVTCGNNRLT VKCWRPVSRL ETKDPSPVQR GETDVDALHG 540 NGGGQNLSGP SCLGLCSVDG NDIGFENDFS HLEGRVDPGS LRFSSCAAKA FLAQRWKEAI 600 LSDHVTLVVS HDSEPPGCQE IQDFKIAECQ SSDVDKCNIP AIAENTLPGT TRVTKSKPRL 660 KSEKGTKIKY IPKRMTTT

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN  60
NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG  120
AYWDKLSVEE AKEVVSFENV MLEEVQGSSI LNALTSLVRK QGFSPLPQYY LRAGAALLDI  180
VQSKPSSFPI SSQELFSTLD DASEKTCLWG TAVSMQRYVF DGEAGKIGLE PKNLVACTSF  240
LLEQKLVKAW LADKDAEALK CQKQLVEEEE AAQKRQAEIL ERKRQKKLRQ KEQKAREQRG  300
KDETEIKGNT ASTVKALSPE EASLDTYNFP ENALSHVPFQ CPETSEGIDG ETDTHSGYEF  360
VTDQNIGRQS AHGQNHQHIA VARWQQGLPK SQWAVANALH TNQNSQISKV DLIQKHGTHR  420
DSSKVWSRKP KTEIDKVVLK TIIEGESNQV KNHEVLIGSI SVNLGNSNQL EGNMVASQED  480
CMVENVAKQN SFQDKPTKPD FVTCGNNRLT VKCWRPVSRL ETKDPSPVQR GETDVDALHG  540
NGGGQNLSGP SCLGLCSVDG NDIGFENDFS HLEGRVDPGS LRFSSCAAKA FLAQRWKEAI  600
LSDHVTLVVS HDSEPPGCQE IQDFKIAECQ SSDVDKCNIP AIAENTLPGT TRVTKSKPRL  660
KSEKGTKIKY IPKRMTTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	288	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-130	C2H2 family protein