PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027358746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 99aa MW: 11181.5 Da PI: 6.2485 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.7e-08 | 29 | 72 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+++ + + +a + + ++ +W Iar +g g+t++++k ++ XP_027358746.1 29 AWTAQDNKAFERALAIYDKDtpeRWWNIARAVG-GKTPEEVKGHY 72 8********************************.********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MTVYTEVYLQ DIGKAVHHLI NSMSSSGSAW TAQDNKAFER ALAIYDKDTP ERWWNIARAV 60 GGKTPEEVKG HYDLLVEDIK RIESGQVPFP TYRNPKDGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 3e-32 | MYB_related family protein |