PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358453.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 478aa MW: 52534.3 Da PI: 6.155

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	301	343	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_027358453.1 301 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 343 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MLPTRANNTH NVPWMEPQHE EEKAWTRTNI NNDDNTNHHR NDVVMDAAAL LSFKSMLEVE 60 GDWYMNPPHQ DLLQNDASFL MEPLDSSSSA PSFTLDPTKP SFPSFFNVNA NNPFDNAFDL 120 GSNSGFLAPF PSSSSPVLFL PLELSSNPEF AATRAAQLSA GEFPQEGAFG ASDVPLLSTA 180 KVLRPLEEVP PVAAPPTLFQ KRAALHGGHS GAGKLGELEV SVPRWFGLER KSGKEGEVEE 240 GLNYESDEVV KLEENGGNNL NANNNDNDNC VNNNKKKKNN NGVDGGEQKG KKKGLPAKNL 300 MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL KELLQRINEL HNELESSSPS 360 SSLPPVTPTL PILPCRVKEE LCLSSLPSPK HQSAKVEVKV REGRAVNIHM FCGRRPGLLL 420 STMRALDNLG LDVQQAVLSC FNGFALDVFR AEQCRGQDVL PEKIKAVLLD TAGSHGMI

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MLPTRANNTH NVPWMEPQHE EEKAWTRTNI NNDDNTNHHR NDVVMDAAAL LSFKSMLEVE  60
GDWYMNPPHQ DLLQNDASFL MEPLDSSSSA PSFTLDPTKP SFPSFFNVNA NNPFDNAFDL  120
GSNSGFLAPF PSSSSPVLFL PLELSSNPEF AATRAAQLSA GEFPQEGAFG ASDVPLLSTA  180
KVLRPLEEVP PVAAPPTLFQ KRAALHGGHS GAGKLGELEV SVPRWFGLER KSGKEGEVEE  240
GLNYESDEVV KLEENGGNNL NANNNDNDNC VNNNKKKKNN NGVDGGEQKG KKKGLPAKNL  300
MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL KELLQRINEL HNELESSSPS  360
SSLPPVTPTL PILPCRVKEE LCLSSLPSPK HQSAKVEVKV REGRAVNIHM FCGRRPGLLL  420
STMRALDNLG LDVQQAVLSC FNGFALDVFR AEQCRGQDVL PEKIKAVLLD TAGSHGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	309	KKKGLPAKNLMAERRRRKK
2	303	310	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-103	bHLH family protein