PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358445.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 404aa    MW: 45054.4 Da    PI: 8.2152
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.74.1e-08167187526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd C FaHg
  XP_027358445.1 167 ACPDFRK-GNCKKGDACEFAHG 187
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MVNPNRTTVK WQFIREANHA GVSVNIHIQP KPNTKMMLGE HHRANPTVHV PPWPIHDDPT  60
AEMYSPYAAN DGNAGEYSPY YLQEALTALQ RYLPSNETDA DSDSEVPGRE SDAPVDAYSC  120
DHFRMFEFKV RRCARGRSHD WTECPYAHPG EKARRRDPRK FHYSGTACPD FRKGNCKKGD  180
ACEFAHGVFE CWLHPARYRT QPCKDGTSCR RRVCFFAHTP EQLRLMPQQS PRSANSADSY  240
DGSPLRQVSM PFMSSPASVS PPESPPMSPM TQSLSRSLGS SSMNEMVASL RNLQLGKLKS  300
IPSSRNVQMG SPGFGSPRGS VLRPGFSSLP STPTQAPGRS GVNYFELWDQ SCEEEPVMER  360
VESGRDIRAK MFEKLSKENS LDGSGSGRQM GGAPDFGWVS ELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-143C3H family protein