PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358412.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 644aa MW: 71477.7 Da PI: 5.4023

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.4	2.2e-29	66	150	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++r++k+Ckek+en+ k++k++keg++++++++ t+++fdqlea XP_027358412.1 66 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGK--TYRFFDQLEA 150 8******************************************************************975544..6*****85 PP
2	trihelix	100.9	1e-31	469	553	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev++Li++r+++e++++++ k+plWee+s m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ le XP_027358412.1 469 RWPKVEVQELINLRTSLETKYQESGPKGPLWEEISTLMKKMGYNRSAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHLLE 553 8*******************************************************************8.99*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MLGDSAVLGT GGGSSGDAVA GSAVAAASGG AHEGADVAAG GGGGSNSGDD ERGRGEEGDK 60 SFGGNRWPRQ ETLALLKIRS DMDVAFRDAS VKGPLWEEVS RKLAELGYHR NAKKCKEKFE 120 NVYKYHKRTK EGRSGKSEGK TYRFFDQLEA LENNPAIQSP TPTSKPPLQT IALPATPVSI 180 VASSASSLPL PTTTVPLQPV ANNTTTIAST TTLPMAVSQG ILNIIPSTIN ITTPSYPSSN 240 PTYFTTPTPN PTSKNPPNTI NPSSFPNIPT DLLSNSSSSS TSSEETLEGG GTRRKRKRKW 300 KDFFERLMKE VIEKQEELQR RFLEAIEKRE HERVAREEAW RMQEMQRINR EREILAHERS 360 IAAAKDAAVM AFLQKIAEQQ QQQINLEPAL NNNNNINIVP PVQQATTAPT TVQQTQTTAI 420 PEAPPAQSLA PQQQHHQVHQ QQQQVVTNVE IVKADNNGEN LMMGTSSSRW PKVEVQELIN 480 LRTSLETKYQ ESGPKGPLWE EISTLMKKMG YNRSAKRCKE KWENINKYFK KVKESNKKRP 540 EDSKTCPYFH LLEALYREKN KGEGQMKPES MMAPLMVPPE QQWPPQHAAV PEVTMEDAQN 600 DPMDLQHHNE EDEDEEMDKE IGDDDEDEDD DGGDNYEIVA RPFP

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MLGDSAVLGT GGGSSGDAVA GSAVAAASGG AHEGADVAAG GGGGSNSGDD ERGRGEEGDK  60
SFGGNRWPRQ ETLALLKIRS DMDVAFRDAS VKGPLWEEVS RKLAELGYHR NAKKCKEKFE  120
NVYKYHKRTK EGRSGKSEGK TYRFFDQLEA LENNPAIQSP TPTSKPPLQT IALPATPVSI  180
VASSASSLPL PTTTVPLQPV ANNTTTIAST TTLPMAVSQG ILNIIPSTIN ITTPSYPSSN  240
PTYFTTPTPN PTSKNPPNTI NPSSFPNIPT DLLSNSSSSS TSSEETLEGG GTRRKRKRKW  300
KDFFERLMKE VIEKQEELQR RFLEAIEKRE HERVAREEAW RMQEMQRINR EREILAHERS  360
IAAAKDAAVM AFLQKIAEQQ QQQINLEPAL NNNNNINIVP PVQQATTAPT TVQQTQTTAI  420
PEAPPAQSLA PQQQHHQVHQ QQQQVVTNVE IVKADNNGEN LMMGTSSSRW PKVEVQELIN  480
LRTSLETKYQ ESGPKGPLWE EISTLMKKMG YNRSAKRCKE KWENINKYFK KVKESNKKRP  540
EDSKTCPYFH LLEALYREKN KGEGQMKPES MMAPLMVPPE QQWPPQHAAV PEVTMEDAQN  600
DPMDLQHHNE EDEDEEMDKE IGDDDEDEDD DGGDNYEIVA RPFP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	298	RRKRKR
2	293	299	RRKRKRK
3	294	299	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	6e-55	Trihelix family protein