PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358161.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 412aa    MW: 45319.3 Da    PI: 7.5667
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.61e-0889109526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+++ + G C++G+rCkF H+
  XP_027358161.1  89 VCNYWIQ-GNCSFGERCKFLHS 109
                     6******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MDVDGGNKRV YNRLGADAKH QKVCFHWQAG KCNRYPCPYL HSELPSSHAN GTSSKRPYEN  60
SGFSGPRRSP NFNTWGRGGG RVVVKADKVC NYWIQGNCSF GERCKFLHSW SVGDGFSLLT  120
QLEGHQKVVS GIAFPSGSDK LYTGSTDETV RLWDCQSGKC MAVVTLGGEV GCMISEGPWV  180
FVGIPNFVKA WNTQNSMELS LNGPVGQVYA LVVINDMLFA GTQDGSILAW KFNVVTNCFE  240
PAASLKGHSR GVVSLVVGAN RLYSGSMDNT IRVWNLETLQ CLQTLTDHTS VVMSVLCWDQ  300
FLLSCSLDKT VKVWYATESG NLEVTYTHNE ENGIVTLCGM HDSQGKPILL CSCNDNTVRL  360
YDLPTFAERG KIFTKQEVRA IQTGPNGIFF TGDGTGQVRV WNWIAEPTTT GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein