PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358158.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 321aa MW: 35239.5 Da PI: 8.2451

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	100	4.1e-31	47	164	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsss 87 g+kdrhsk++T +g+RdRRvRls+++a+ ++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ +++ +++s s ++s + XP_027358158.1 47 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTlgypslvtcNEVSTSREGSGQ-- 139 689*************************************************************77777555544333321222222222211.. PP TCP 88 g.......................k 89 + + XP_027358158.1 140 NtiwkskskevsgemvsdkenwinR 164 1333333223333333333333321 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MINSTKEADF SLKQEGVSSD EKAKASSSTS QWLKLKDPRI VRVSRAFGGK DRHSKVCTIR 60 GLRDRRVRLS VPTAIHLYDL QDRLGLSQPS KVVDWLLNAA KHEIDELPPL PIPPGNFTLG 120 YPSLVTCNEV STSREGSGQN TIWKSKSKEV SGEMVSDKEN WINRSEEADN NKHGSNDCPS 180 AHVLPNNLNP RANHPSFLGL LNTMPFGYQW ETNSADVAQL ANHGFVNQTD IHSINVVPFP 240 STLALSTGST TSQILVCPPG STQPYFPSHV AAMEMNPRQI NHNQMLSSSC QNPLTNSLGS 300 SQHLMSQSGK VPFNLDQTGK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	4e-39	TCP family protein