PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357986.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 283aa MW: 32386 Da PI: 4.4344

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7e-20	65	118	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++ LAkklgL+ rqV vWFqNrRa++k XP_027357986.1 65 KKRRLTSEQVHLLEKSFEEENKLEPERKTLLAKKLGLQPRQVAVWFQNRRARWK 118 56789************************************************9 PP
2	HD-ZIP_I/II	133	1.1e-42	64	155	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv+lLE+sFeee+kLeperK+ la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ ke+e+L++e+ XP_027357986.1 64 EKKRRLTSEQVHLLEKSFEEENKLEPERKTLLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDSLLSSYDSIVKENEKLKSEMV 155 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MESGRLFFDA SACRGNNMLF LGNAELAFRG RSMMSMEEGS KRRPFFTSPD ELFDEEYYEE 60 QLPEKKRRLT SEQVHLLEKS FEEENKLEPE RKTLLAKKLG LQPRQVAVWF QNRRARWKTK 120 QLERDYDVLK SSYDSLLSSY DSIVKENEKL KSEMVSLNEK LQVQAKEVPE EPLHDKKIDP 180 LLVDDIAPIF STKVEDHLSS GSVGSAVVDE GSPQLVVDSV DSYFPADNYG GCVAPVERVQ 240 SEEEDGSDDG RSYLDVFVAS ETEHQSHEEG EALGWWSNMY YVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	9e-89	HD-ZIP family protein