PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357985.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 284aa MW: 32457.1 Da PI: 4.4344

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.1e-20	66	119	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++ LAkklgL+ rqV vWFqNrRa++k XP_027357985.1 66 KKRRLTSEQVHLLEKSFEEENKLEPERKTLLAKKLGLQPRQVAVWFQNRRARWK 119 56789************************************************9 PP
2	HD-ZIP_I/II	133	1.1e-42	65	156	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv+lLE+sFeee+kLeperK+ la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ ke+e+L++e+ XP_027357985.1 65 EKKRRLTSEQVHLLEKSFEEENKLEPERKTLLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDSLLSSYDSIVKENEKLKSEMV 156 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MESGRLFFDA SACRGNNMLF LGNAELAFRA GRSMMSMEEG SKRRPFFTSP DELFDEEYYE 60 EQLPEKKRRL TSEQVHLLEK SFEEENKLEP ERKTLLAKKL GLQPRQVAVW FQNRRARWKT 120 KQLERDYDVL KSSYDSLLSS YDSIVKENEK LKSEMVSLNE KLQVQAKEVP EEPLHDKKID 180 PLLVDDIAPI FSTKVEDHLS SGSVGSAVVD EGSPQLVVDS VDSYFPADNY GGCVAPVERV 240 QSEEEDGSDD GRSYLDVFVA SETEHQSHEE GEALGWWSNM YYVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	122	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-89	HD-ZIP family protein